TABLE 4.
Primers used for quantitative real-time-PCR
| Gene (locus tag) | Sequence |
Production length (bp) | |
|---|---|---|---|
| 5′ | 3′ | ||
| dhaK1 (DA795_03250) | GTGATGCTCAATAACCTC | GCCTATTAACCAGTCAATG | 105 |
| dhaM (DA795_03255) | CGGCAGATGTTAATCAAC | CATGACTTTAAGCGGATC | 96 |
| dhaL (DA795_03260) | CTGAACAGAACGCAAATC | GTCGCCAATCTCTTTATC | 99 |
| dhaK2 (DA795_03265) | CTGTATGGCGTGTATAAC | CTGTATGGCGTGTATAAC | 122 |
| dhaD (DA795_03280) | ATCGGTTACTACCAGAAG | TCGGATAGATCAGATACTC | 127 |
| dhaR (DA795_03285) | GCGTCATTGAGAATATCG | GCGTGAATAATAGCTTCC | 163 |
| orfW (DA795_03290) | CCGTCGATGAACTGATATC | CGTCTGCTGAATATGGTG | 92 |
| dhaG (DA795_03295) | CCATAACCTATGACGGAG | ATGAGTGAGGGCTATCTC | 116 |
| dhaT (DA795_03300) | GTCTCTATCAACGATCCA | GCGTCTTTGGAGATATAG | 110 |
| orfY (DA795_03305) | GCGTCTTTGGAGATATAG | GTCAACTACGGAAAACAC | 102 |
| dhaB1 (DA795_03310) | GACCAGTTTGACATGATC | GAATATCCACCAGCATAC | 115 |
| dhaB2 (DA795_03315) | CCCTCTTTTACCCTGAAA | GTGATGCTGGTGTTTATC | 108 |
| dhaB3 (DA795_03320) | TGCAGGATTATCCGTTAG | GAGGGTAATATCGGTCAA | 80 |
| dhaF (DA795_03325) | CTCTCGCATCTATCTTAAC | GATTCGGTGATAATGGTC | 84 |
| glpF1 (DA795_03330) | CCAGACTTCTACCTTAAC | GATAATACTGATCTCCCAC | 136 |
| yqhD (DA795_03630) | GGTTCTGAATCCAACAAAG | TGGCAGGGTATAGGTATA | 126 |
| pduG (DA795_04840) | ATGGAGAGTAGCGTAGTC | ATGCCTTCCTCTTCAATG | 101 |
| pduH (DA795_04845) | TATATTCTGGTGGTCTCC | GATATGCTGAACTTCGTC | 101 |
| pduE (DA795_04850) | CCAAAAGTTAGCGACTAC | GCTTAATACGTTCTCCAG | 102 |
| pduD (DA795_04855) | GAAGTCATTATTGCCGTC | GATGCCTTCTTCCTCAAT | 117 |
| pduC (DA795_04860) | CCTATTACGGATGAAGAAG | CTTGTTGATGATCTCCTG | 111 |
| gldA (DA795_25500) | GCCCACTTTATGAATGTG | CTTCGTCGGTGTATATCA | 94 |
| glpF2 (DA795_26795) | CTTGTGATGATTGGTGTAG | GGCTGAAAACAGATGTATG | 120 |
| glpF3 (DA795_00510) | GTTTACGGGCTTTACTAC | GTTTACGGGCTTTACTAC | 107 |
| glpF4 (DA795_04875) | CCAGTATATTCAGCACCTA | CAGAATGCCAATCAACAG | 164 |
| glpK (DA795_00505) | GGTAAACCCATCTACAAC | CTTGCGGATATACTCTTC | 99 |
| glpR (DA795_01675) | CACAACGATCTGCGAATT | CGAGAATAATGCGGAAGTC | 82 |
| pdh1 (DA795_17085) | CGAGAATAATGCGGAAGTC | GTTGATGTCGATCTGGATA | 125 |
| pdh2 (DA795_21375) | TGAATTGACCACCATCTC | ACTCTTTACCATTCCATACC | 194 |
| pdh3 (DA795_21380) | GGTATGGAAGGTCTGTTC | TTGTTGGTGCTGTAAGAG | 188 |
| 16s RNA (DA795_01305) | AATACGATATGGACCTGG | GACATGAACGGTGTTAATC | 95 |