Table 3.
Isolate No. | Quinolone resistance profile | No. of quinolones with resistance | PMQR profile | No. of detected PMQR genes |
---|---|---|---|---|
Ps1 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps3 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps4 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps5 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps6 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps7 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps8 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps9 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD | 2 |
Ps10 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps11 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps12 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrS | 2 |
Pp13 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps14 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps15 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps16 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps17 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps18 | NAL, CIP, NOR, OFL, LEV, MOX | 6 | - | 0 |
Ps19 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrS | 2 |
Ps20 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrS | 2 |
Ps21 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps23 | NAL, CIP, NOR, OFL, LEV, MOX | 6 | acc(6ʹ)-Ib-cr | 1 |
Ps24 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 6 | qnrD | 1 |
Ps25 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps26 | NAL, CIP, NOR, OFL, LEV, MOX | 7 | qnrD, qnrS | 2 |
Ps27 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps28 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps29 | NAL, CIP, NOR, OFL, LEV, MOX | 6 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps30 | NAL, CIP, NOR, OFL, LEV, MOX | 6 | qnrD, qnrS | 2 |
Ps31 | NAL | 1 | qnrS | 1 |
Ps32 | NAL | 1 | qnrD | 1 |
Ps33 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps34 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD | 2 |
Ps35 | NAL, CIP, NOR, OFL, GEM, LEV, MOX | 7 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Pp36 | NAL, MOX | 2 | qnrD, qnrS | 2 |
Ps37 | NAL, MOX | 2 | qnrD, qnrS | 2 |
Ps38 | NAL, CIP, NOR, OFL, LEV, MOX | 6 | acc(6ʹ)-Ib-cr, qnrD, qnrS | 3 |
Ps39 | NAL, NOR, OFL, LEV, MOX | 5 | qnrS | 1 |
Ps40 | NAL, CIP, NOR, OFL, MOX | 5 | qnrD | 1 |
Ps41 | NOR | 1 | - | 0 |
Abbreviations: NT, not tested; NAL; Nalidixic acid, CIP; Ciprofloxacin, NOR; Norfloxacin, OFL; Ofloxacin, GEM; Gemifloxacin, LEV; Levofloxacin, MOX; Moxifloxacin; PMQR, plasmid-mediated quinolone resistance.