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. 2019 May 3;10:2043. doi: 10.1038/s41467-019-10068-5

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — Number of unique PULs according to the number of genomes analyzed. The number of PULs was calculated by randomly resampling an increasing number of genomes from our data set (x-axis). The resampling was performed ten times; the median value is represented on the y-axis. A second order polynomial regression gives the trend of two sets of values corresponding to 0 (red) and 20% (blue) mismatch used during PUL clustering