Table 4.
Prediction of miRNAs for VvMTP transcripts
| miRNA Acc. | Target gene | Alignment | Inhibition |
|---|---|---|---|
| bdi-miR5180a | VvMTP1 |
miRNA 21UCAAGUUUUGACUCUGUGAAU 1 Target473 UCUUCAGGAUUGAGAUACUUG 93 |
Cleavage |
| bdi-miR5180b | VvMTP1 |
miRNA 21 UCAAGUUUUGACUCUGUGAAU 1 Target 473 UCUUCAGGAUUGAGAUACUUG 493 |
Cleavage |
| ptc-miR473b | VvMTP1 |
miRNA 20 ACCUUCGGGACUCCCUCUCG 1 Target 947 UGGAGGUUCUGAUGGAGAGC 966 |
Cleavage |
| ppt-miR1221-5p | VvMTP11 |
miRNA 21 AAACUGGGACGUGUGGUAGGU 1 Target 852 UCUGGCCUUGUACACCAUCCG 872 |
Cleavage |
| aly-miR158b-5p | VvMTP12 |
miRNA 20 AAAGGUUUUAACAUCUGUUU 1 Target 35 CUUCUAUGAUUGUGGAUAAA 54 |
Cleavage |
| ath-miR398b-5p | VvMTP12 |
miRNA 21 CACACAAGAGUAUAGUUGGGA 1 Target 1425 UGGGGUUGUUAUAUCAACCCU 1445 |
Cleavage |
| ath-miR398c-5p | VvMTP12 |
miRNA 21 CACACAAGAGUAUAGUUGGGA 1 Target 1425 UGGGGUUGUUAUAUCAACCCU 1445 |
Cleavage |
| aly-miR156 h-3p | VvMTP8 |
miRNA 21 CCACCGUCUUCCUUUCUCUCG 1 Target 186 CUUGGUUGAAGGAGAGAGAGA 206 |
Cleavage |
| smo-miR1099 | VvMTP8 |
miRNA 21 CUGUUUUUGUGGUAACGAUAU 1 Target 9 UGUAAAAACACCAUUGUUGUC 29 |
Cleavage |
| osa-miR2875 | VvMTP7 |
miRNA 24 AUAUUUGACAUAUACUGACAUUUA 1 Target 1058 UUGAUGCUCUAUAUGAUUGUAAAA 081 |
Cleavage |
| ppt-miR1076-5p | VvMTP8.1 |
miRNA 21 GUUAAUAGCGUGGAACACUAU 1 Target 982 AAAUUGACGUAUCUUGUGAUA 1002 |
Cleavage |
| osa-miR1882e-3p | VvMTP9.1 |
miRNA 24 GAUCUAAUGCAGGUUCUAGUAAAG 1 Target 742 AGGGCAUAUGCUCAAGAUCAUUUC 765 |
Cleavage |
| ptc-miR6456 | VvMTP9.1 |
miRNA 21 CCUAGAUUACCUUCCUGAGUU 1 Target 225 GAAGCUACUGGAAGGGUUCAA 245 |
Cleavage |