Table 7.
Overview of closest nucleotide identities of “Candidatus R. yenbekshikazakhensis” and “genotype R. talgarensis” with the first hit in BLAST with Rickettsia spp.
| Gene | Maximum identity to known Rickettsia spp. | “Candidatus R. yenbekshikazakhensis” | Genotype R. talgarensis |
|---|---|---|---|
| ompB | > 99.2 | 99.0% (CP013133): R. rhipicephali | na |
| ompAIV | > 98.8 | 99.0% (U83446): R. aeschlimanni | 92.7% (CP003304): R. canadensis |
| 23S-5S | na | 96.1% (AY125016): R. aeschlimannii | 88.4% (CP003304): R. canadensis |
| 16S | > 99.8 | 99.8% (CP003319): R. massiliae; 99.8% (HM050274): R. aeschlimannii |
99.4% (CP003319.1): R. massiliae |
| sca4 | > 99.3 | 99.1% (HM050275): R. aeschlimanniia; 98.3% (HM050275): R.aeschlimanniib | na |
| gltA | > 99.9 | 100% (CP015012): R. amblyommatis; 100% (KU723495): R. aeschlimannii; 100% (KT588058): R. massiliae |
na |
* According to [8]
aAll sequences from Yenbenshikazakh
bSample Tekeli 093
Abbreviation: na, no sequences available for comparison