Table 6.
Chosen genes up- and downregulated in ZW (genetic females) gonads at NF62 in relation to NF56 stage
| Probe name | Gene symbol | Gene name | Log FC |
|---|---|---|---|
| Genes upregulated (higher expression at NF62 than at NF56) | |||
| A_10_P000661 | spdyc-b | Speedy/RINGO cell cycle regulator C | 5.91483 |
| A_10_P041271 | pabpn1l-a | Poly(A) binding protein, nuclear 1-like | 5.78779 |
| A_10_P078660 | rnf138 | Ring finger protein 138 | 5.43076 |
| A_10_P004355 | pou5f3.3 | POU class 5 homeobox 3, gene 3 | 4.82381 |
| A_10_P002029 | zar1 | Zygote arrest 1 | 4.7962 |
| A_10_P038461 | LOC398389 | Survivin | 4.75826 |
| A_10_P027361 | vegt-a | vegt protein | 4.68137 |
| A_10_P007276 | aldh3b1 | Aldehyde dehydrogenase 3 family, B1 | 4.65557 |
| A_10_P032511 | cldn6.1 | Claudin 6, gene 1 | 4.50308 |
| A_10_P162298 | zp2 | Zona pellucida glycoprotein 2 | 4.43055 |
| A_10_P009533 | gdf1 | Growth differentiation factor 1 | 4.40831 |
| A_10_P002027 | velo1 | velo1 protein | 4.36483 |
| A_10_P027280 | zpd | Zona pellucida protein D | 4.2713 |
| A_10_P205908 | foxh1 | Forkhead box H1 | 4.2256 |
| A_10_P031016 | foxr1 | Forkhead box R1 | 4.10517 |
| A_10_P008731 | wnt11b | Wingless-type MMTV integration site family, member 11B | 4.0833 |
| A_10_P033516 | zpy1 | Zona pellucida protein Y1 | 4.00754 |
| A_10_P117061 | ddx25 | DEAD box helicase 25 | 3.89223 |
| A_10_P040816 | sycp3 | Synaptonemal complex protein 3 | 3.70889 |
| A_10_P071715 | lhx8 | LIM homeobox 8 | 3.56271 |
| A_10_P056732 | dppa2 | Developmental pluripotency-assoc 2 | 3.51303 |
| A_10_P027350 | adam21 | ADAM metallopeptidase domain 21 | 2.89064 |
| Genes downregulated (higher expression at NF56 than at NF62) | |||
| A_10_P047196 | LOC100037217 | Uncharacterized LOC100037217 | 6.582348 |
| A_10_P180718 | hrg | Histidine-rich glycoprotein | 6.249551 |
| A_10_P004053 | rbp4 | Retinol-binding protein 4 | 5.794043 |
| A_10_P034336 | serpina1 | Serpin peptidase inhibitor, A1 | 5.541168 |
| A_10_P006319 | sag | Arrestin | 5.153979 |
| A_10_P075910 | serpini2 | Serpin peptidase inhibitor, I2 | 4.285183 |
| A_10_P030976 | LOC398504 | Villin-1-like | 3.897723 |
| A_10_P068493 | fetub | Fetuin B | 3.871496 |
| A_10_P110124 | krt12 | Keratin 12 | 3.5294 |
| A_10_P006916 | emx1.2 | Empty spiracles homeobox 1, gene 2 | 3.507484 |
| A_10_P002103 | mmp7 | Matrix metallopeptidase 7 | 3.50358 |
| A_10_P153143 | igf3 | Insulin-like growth factor 3 | 3.452683 |
| A_10_P003788 | igfbp1-a | Insulin-like growth factor–binding 1 | 3.06992 |
| A_10_P005507 | ctsl | Cathepsin L | 2.882569 |
| A_10_P137683 | gata2 | GATA binding protein 2 | 2.5687 |
| A_10_P053899 | cdh26 | Cadherin 26 | 2.529154 |
| A_10_P126889 | rdh16 | Retinol dehydrogenase 16 (all-trans) | 2.355785 |
| A_10_P174228 | chrd | Chordin | 2.347432 |
| A_10_P007857 | timp2 | TIMP metallopeptidase inhibitor 2 | 2.066979 |