Table 2.
Primers and used for detection of virulence genes
| Primer | Primer direction | PCR product size (bp) | Reference |
|---|---|---|---|
| cdt | F: 5′-AAATCACCAAGAATCATCCAGTTA-3′ R: 5′-AAATCTCCTGCAATCATCCAGTTTA-3′ |
430 | [21] |
| kpsMTII | F: 5′-GCGCATTTGCTGATACTGTTG-3′ R: 5′-CATCCAGACGATAAGCATGAGCA-3′ |
272 | [21] |
| TcpC | F: 5′-GAGTGGAAGGAGGTTGAGGC-3′ R: 5′-GCAGTGCCATTTTATCCGCC-3′ |
544 | [22] |
| iutA | F: 5′-GGCTGGACATCATGGGAACTGG-3′ R: 5′-CGTCGGGAACGGGTAGAATCG-3′ |
302 | [23] |
| traT | F: 5′-GGTGTGGTGCGATGAGCACAG-3′ R: 5′-CACGGTTCAGCCATCCCTGAG-3′ |
290 | [23] |
| hlyA | F: 5′-GCATCATCAAGCGTACGTTCC-3′ R: 5′-AATGAGCCAAGCTGGTTAAGCT-3′ |
534 | [24] |
| cnf1 | F: 5′-AAGATGGAGTTTCCTATGCAGGAG-3′ R: 5′-CATTCAGAGTCCTGCCCTCATTAT-3′ |
498 | [25] |
| ibeA | F: 5′-AGGCAGGTGTGCGCCGCGTAC-3′ R: 5′-TGGTGCTCCGGCAAACCATGC-3′ |
171 | [25] |
| vat | F: 5′-AACGGTTGGTGGCAACAATCC-3′ R: 5′-AGCCCTGTAGAATGGCGAGTA-3′ |
420 | [25] |
| sat | F: 5′-TCAGAAGCTCAGCGAATCATTG-3′ R: 5′-CCATTATCACCAGTAAAACGCACC-3′ |
930 | [25] |
| pic | F: 5′-ACTGGATCTTAAGGCTCAGGAT-3′ R: 5′-GACTTAATGTCACTGTTCAGCG-3′ |
572 | [25] |
| CsgA | F: 5′-GGCGGAAATGGTTCAGATGTTG-3′ R: 5′-CGTATTCATAAGCTTCTCCCGA-3′ |
295 | [26] |