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. 2019 May 6;10:19. doi: 10.1186/s13100-019-0161-8

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 7 — Retrotransposons contribution to protein coding and lncRNA genes. a The proportion of protein coding (pc) genes and lncRNA genes overlapping with retrotransposon insertions. b The proportion of TE insertions in the introns and exons of protein coding and lncRNA genes, and their flank regions. c The genomic coverage of retrotransposons in protein coding (pc) and lncRNA genic regions, and their flank regions. d The proportion of mRNAs, ESTs, and lncRNAs containing retrotransposon-derived sequences. e Sequence coverage of retrotransposons in lncRNAs and mRNAs. f The proportion of the protein coding genes generating chimeric transcripts with retrotransposons