Table 1.

Statistics for RNA-Seq data sets.

Replicate (T)	Reads (2 × 76 bp)	% aligned readsa	SL-reads	% SL-reads
1 (26 °C)	18,545,439	96.18	687,928	3.71
2 (26 °C)	37,465,333	96.29	1,227,685	3.28
3 (26 °C)	32,304,297	96.50	1,092,996	3.38
1 (37 °C)	26,510,688	96.48	851,959	3.21
2 (37 °C)	32,684,273	96.56	1,054,854	3.23
3 (37 °C)	25,634,781	96.53	794,935	3.10

^aReads alignment was done by Bowtie2 using the updated L. major (Friedlin) genome³⁷.