Table 1.
Predicted percentages of secondary structure for the parent peptides (LL-37 and BMAP-27) and B1 using HNN
| Peptide | Natural sequence | Amino acid (n) | Alpha helix (%) | Extended strand (%) | Random coil (%) |
|---|---|---|---|---|---|
| LL-37 | LLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTES | 37 | 78.38 | 0.00 | 21.62 |
| BMAP-27 | GRFKRFRKKFKKLFKKLSPVIPLLHL | 26 | 53.85 | 15.38 | 30.77 |
| B1 | KFKKLFKKLSPVFKRIVQRIKDFLR | 25 | 88.00 | 0.00 | 12.00 |
Notes: The software used to generate the percentages in this table was from Guermeur Y.16 The bold letters represent the parts that were taken from LL-37 sequence to produce the hybrid peptide.
Abbreviation: HNN, Hierarchical Neural Network.