Table 3.
Network/Gene statistic | GSE14764 | GSE17260 | GSE9891 |
---|---|---|---|
Degree Cor. | 0.044 | 0.070 | 0.038 |
Betweenness Cor. | 0.047 | 0.059 | 0.030 |
pDE Cor. | 0.060 | 0.103 | − 0.051 |
The three columns are the rank correlation between GeneSurrounder results (pGS) and network/gene statistics (Degree, Betweenness, and pDE) across all genes in each dataset. The Degree and Betweenness are two different network centrality measures. The Degree is the number of connections a node has and the Betweenness is the fraction of shortest paths that passes through the node. pDE is the p-value obtained from a standard differential expression t-test