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. 2019 May 6;20:229. doi: 10.1186/s12859-019-2829-y

Table 4.

Cross study concordance of GeneSurrounder results compared to differential expression analysis and LEAN

Ovarian cancer study pair pGS Cor. pDE Cor. pLEAN Cor.
GSE14764 - GSE17260 0.342 0.040 0.056
GSE14764 - GSE9891 0.436 0.056 0.130
GSE17260 - GSE9891 0.485 0.138 0.290

The columns pGS Cor., pDE Cor., and pLEAN Cor. are the Spearman rank correlations respectively between the results obtained from GeneSurrounder, differential expression analysis, and LEAN for each study pair