Table 1. Major DVG junctions identified by VODKA from RSV positive nasal secretions.
| T'_W | Total count |
Partial junction reads sequence | Sample ID | Reference genome | Rejoin location |
|---|---|---|---|---|---|
| 12955(-3)_14951(+3) | 640 | …ACAATGTTAGTGTGTAGC/G:::TATTTTTGTTATAAGATT… | H73, H7, H81, H82, H86, H66, H75, H84 | KJ672447 | Rejoin1 |
| 12121(±3)_13717(±3) | 171 | …ACATAAAA/TTATACAAA/C:::AAGCACTATAGCTAGTGGCATAA… | H73, H7, H81, H82, H86, H66, H75 | KJ672447 | Ahead of Rejoin1 |
| 14753_15005(+3) | 162 | …TTTTAGTTGTTCAAT/A:::CATGTTTTAAATTTC… | H73, H7, H81, H82, H86 | KJ672447 | Early Trailer |
| 13568(-1)_13726(+1) | 111 | …AACCCTAGAAAATAA:::ACTAACCAATCCGGTTAAAAGTAATG… | H73, H7, H81, H82, H86 | KJ672447 | Ahead of Rejoin1 |
| 12234(+1)_14212(-1) | 95 | …CACAAGAGAAAAAGACT:::ATGCCAGTTTATAATAGTCAA… | H73, H7, H81, H82, H86 | KJ672447 | Ahead of Rejoin1 |
| 12529_14474 | 33 | TACTACATTAAATAC:::CATATTAACAATAGTATGG | H8, H73, H81 | KJ672447 | Ahead of Rejoin1 |
::: breakpoint of DVG junction reads.