Table 2.
Primers used in this study
Primer ID | Sequence | Endonuclease/template |
---|---|---|
Pantothenate | ||
panBfwd | tatacatatgaaaaataccactgaaac | NdeI/C. acetobutylicum |
panCfwd | tatacatatggaaattttgcattcc | NdeI/C. acetobutylicum |
panDfwd | tatacatatgcatttaaatatgttaaaatctaaa | NdeI/C. acetobutylicum |
panBrev | tatagctagcttatttggtaatttcgtctataatg | NheI/C. acetobutylicum |
panCrev | tatagctagcttatatattccaagtgaaattatctataagg | NheI/C. acetobutylicum |
panDrev | Tatagctagcttagccaattgtcc | NheI/C. acetobutylicum |
panB2fwd | Tataactagtatgaaaaataccactgaaac | SpeI/C. acetobutylicum |
Biotin | ||
bioYDAF1 | tatacatatgattatggtttctatttttgc | NdeI/C. acetobutylicum |
bioYDAR1 | tatagctagcttattcaagatactgctctatactttc | NheI/C. acetobutylicum |
bioBDFF1 | tatacatatgagcaatattttgaaacatatcg | NdeI/D. carboxidivorans |
bioBDFR1 | tatagctagcttaaatcaatcccagttc | NheI/D. carboxidivorans |
bioHCAF1 | tatacatatgttggaaaaacagagattaatcc | NdeI/D. carboxidivorans |
bioHCAR1 | tatagctagcttaatctattccaaaatagttattaattgc | NheI/D. carboxidivorans |
Thiamine | ||
thiCpurFfwd | gcagggcccaatacgattatctcctttc | ApaI/C. ragsdalei |
thiCpurFrev | gcatcctgcaggtaaattttgttcttcatt | SbfI/C. ragsdalei |
ACE | ||
SHAF | tccgcggaagggcattttctactttcttc | SacII/C. ljungdahlii |
SHARd | agcggccgccacatcttcagaaattataattttttctcc | NotI/C. ljungdahlii |
SHARc | agcggccgcttatttgaatactctacttccaggc | NotI/C. ljungdahlii |
GHAF | tatgctagcgtcgaaaaaatcaatgcacgatgc | NheI/C. ljungdahlii |
GHAR | aggcgcgcctactgggtaacggaacctg | AscI/C. ljungdahlii |
CH21thlF1 | tatagctagcccgctttttaacaaaatatattg | NheI/pMTL8xxx2 |
CH21thlR1 | tataactagtggggtaacagataaaccatttc | SpeI/pMTL8xxx2 |
cacpyreF | atggaacaatacaaacaagaatttatag | / C. acetobutylicum |
cacpyreR | gagtactataaagagtatggagtaaaatag | / C. acetobutylicum |
HiFi assembly | ||
P1F | atgaaatagattgaaatgagcaatattttgaaacatatc | / pMTL-FJAL22 |
P2R | gctactacacttaaatcaatcccagttcttttc | / pMTL-FJAL22 |
P3F | ggattgatttaagtgtagtagcctgtgaaataag | / pMTL-FJAL23 |
P4R | ttgattttttcgacgctagcttaatctattccaaaatagttattaattgc | / pMTL-FJAL23 |