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. 2019 Apr 5;116(9):1637–1649. doi: 10.1016/j.bpj.2019.03.036

Table 4.

Fc Portion Alignment of Currently Published X-Ray Structures

Fc Portion 1 Chain Residues Fc Portion 2 PDB Entry Chain Residues RMSD/Åa
Anti-NPRA H 237–443 Pembrolizumab 5DK3 B 219–443 9.573 NPRA versus 5DK3 (isolated Fc portions)
Anti-NPRA H 237–443 Pembrolizumab G 219–443 0.939
Anti-NPRA K 237–443 Pembrolizumab B 219–443 9.166
Anti-NPRA K 237–443 Pembrolizumab G 219–443 0.799
Anti-NPRA H 237–443 rhu IgG4-Fc 4C54 A 236–443 0.851 NPRA versus 4C54
Anti-NPRA H 237–443 rhu IgG4-Fc B 236–443 0.851
Anti-NPRA K 237–443 rhu IgG4-Fc A 236–443 0.509
Anti-NPRA K 237–443 rhu IgG4-Fc B 236–443 0.719
Anti-NPRA H+K 237–443 rhu IgG4-Fc A+B 236–443 0.829
Anti-NPRA H 237–443 sdhu IgG4-Fc 4C55 A 237–443 0.988 NPRA versus 4C55
Anti-NPRA H 237–443 sdhu IgG4-Fc B 237–443 0.515
Anti-NPRA K 237–443 sdhu IgG4-Fc A 237–443 0.668
Anti-NPRA K 237–443 sdhu IgG4-Fc B 237–443 0.644
Anti-NPRA H+K 237–443 sdhu IgG4-Fc A+B 237–443 0.754
a

Values are generated by superimposition of individual Fc portions as outlined using PyMOL (29).