Table 1.
Summary of genome-wide bisulfite sequencing data for six Drosophila melanogaster samples
| Sample | Clean data (bp) | HQ clean data (bp) | No. of clean read | No. of HQ clean reads (%) | Q20 (%) | Q30 (%) | GC (%) | N (%) | HQ clean data / clean data (%) |
|---|---|---|---|---|---|---|---|---|---|
| CK-1 | 6,342,804,900 | 6,265,486,794 | 42,285,366 | 41,829,038 (98.92%) | 6,127,259,145 (97.79%) | 5,943,780,984 (94.87%) | 1,182,385,554 (18.87%) | 987,865 (0.02%) | 98.78% |
| CK-2 | 5,651,708,700 | 5,543,296,390 | 37,678,058 | 36,998,402 (98.20%) | 5,328,517,738 (96.13%) | 5,021,173,126 (90.58%) | 1,040,523,808 (18.77%) | 593,380 (0.01%) | 98.08% |
| CK-3 | 6,667,975,500 | 6,566,612,690 | 44,453,170 | 43,845,552 (98.63%) | 6,346,014,536 (96.64%) | 6,013,608,683 (91.58%) | 1,291,540,988 (19.67%) | 715,638 (0.01%) | 98.48% |
| s52–1 | 6,380,107,200 | 6,289,532,315 | 42,534,048 | 41,983,774 (98.71%) | 6,135,594,846 (97.55%) | 5,933,616,057 (94.34%) | 1,179,393,128 (18.75%) | 976,796 (0.02%) | 98.58% |
| s52–2 | 6,989,049,900 | 6,860,524,362 | 46,593,666 | 45,809,874 (98.32%) | 6,685,079,771 (97.44%) | 6,464,628,728 (94.23%) | 1,303,391,516 (19.00%) | 1,073,466 (0.02%) | 98.16% |
| s52–3 | 6,172,341,000 | 6,053,568,099 | 41,148,940 | 40,413,472 (98.21%) | 5,787,545,449 (95.61%) | 5,425,219,375 (89.62%) | 1,168,998,770 (19.31%) | 567,912 (0.01%) | 98.08% |
HQ high quality