Table V.
Phylum | Class | Order | Family | Genus | Species | Mean, TIL-L (%) | Mean, TIL-H (%) | P-value | FDR |
---|---|---|---|---|---|---|---|---|---|
Actinobacteria | Actinobacteria | Actinomycetales | Mycobacteriaceae | Mycobacterium | 1.35×10−5 | 0 | 7.97×10−6 | 0.001752485 | |
Actinobacteria | Actinobacteria | Actinomycetales | Nocardiaceae | Rhodococcus | 7.45×10−6 | 0 | 0.000872455 | 0.01998002 | |
Actinobacteria | Coriobacteriia | Coriobacteriales | Coriobacteriaceae | Collinsella | Stercoris | 7.11×10−5 | 0 | 0.000999001 | 0.01998002 |
Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Barnesiae | 9.69×10−5 | 0 | 0.000999001 | 0.01998002 |
Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Coprophilus | 0.012465402 | 5.90×10−5 | 0.002997003 | 0.038784745 |
Euryarchaeota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanosphaera | 0 | 5.40×10−6 | 0.001388066 | 0.025447882 | |
Firmicutes | Erysipelotrichi | Erysipelotrichales | Erysipelotrichaceae | Catenibacterium | 7.09×10−5 | 0 | 0.000999001 | 0.01998002 | |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Blautia | Producta | 2.71×10−5 | 0.000354621 | 0.000999001 | 0.01998002 |
Firmicutes | Erysipelotrichi | Erysipelotrichales | Erysipelotrichaceae | Bulleidia | 6.88×10−6 | 0 | 0.001908364 | 0.032295398 | |
Firmicutes | Clostridia | Clostridiales | Ruminococcaceae | Anaerofilum | 1.43×10−5 | 2.46×10−6 | 0.002518182 | 0.037610265 | |
Firmicutes | Clostridia | Clostridiales | Ruminococcaceae | Ruminococcus | Flavefaciens | 1.04×10−5 | 9.19×10−7 | 0.002735292 | 0.037610265 |
Fusobacteria | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | 2.31×10−5 | 0 | 0.000999001 | 0.01998002 | |
Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Devosia | 1.05×10−5 | 0 | 3.81×10−5 | 0.004192394 | |
Proteobacteria | Deltaproteobacteria | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | C21_c20 | 9.42×10−6 | 0 | 0.00018235 | 0.013372361 |
Proteobacteria | Gammaproteobacteria | Aeromonadales | Succinivibrionaceae | Anaerobiospirillum | 0 | 1.25×10−5 | 0.000999001 | 0.01998002 | |
Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Methylobacterium | Komagatae | 0 | 4.99×10−6 | 0.00262006 | 0.037610265 |
Synergistetes | Synergistia | Synergistales | Dethiosulfovibrionaceae | TG5 | 7.16×10−6 | 8.63×10−7 | 0.000499914 | 0.01998002 |
The difference of microbial community abundance between the two groups was tested using the Metastats software. The P-value was obtained, then the Q-value was corrected by FDR, and the significance of the difference was evaluated by screening the P-value or Q-value. P≤0.05 indicated a statistically significant difference. FDR, false discovery rate; H, high; L, low; TIL, tumor-infiltrating lymphocytes.