Table 3.
RNA‐Seq data collected and mapping statistics
| Treatments | Library | Length after trimming (bp) | Number of reads | Number of bases after trimming (bp) | Percentage uniquely mapped (%) | Percentage of reads mapped to multiple loci | Percentage unmapped |
|---|---|---|---|---|---|---|---|
| Normal watering | GNY1 | 70 | 6,817,359 | 477,215,120 | 67.5 | 18.5 | 14.0 |
| GNY1b | 90 | 18,854,229 | 1,696,880,610 | 70.6 | 15.2 | 14.2 | |
| GNY10 | 90 | 35,853,151 | 3,226,783,590 | 75.3 | 19.2 | 5.5 | |
| Subtotal | 61,524,739 | 5,400,879,320 | |||||
| Waterlogging | GNY3 | 70 | 9,413,900 | 658,973,000 | 68.3 | 15.6 | 14.6 |
| GNY3b | 90 | 23,625,313 | 2,126,278,170 | 71.7 | 15.4 | 12.9 | |
| GNY12 | 90 | 37,852,175 | 3,406,695,750 | 75.1 | 19.3 | 5.5 | |
| Subtotal | 70,891,388 | 6,191,946,920 | |||||
| Total | 132,416,127 | 11,592,826,240 | |||||