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. 2019 May 3;10:955. doi: 10.3389/fmicb.2019.00955

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Copyright © 2019 Hauer, Michelet, Cochard, Branger, Nunez, Boschiroli and Biet.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Detail of number of SNPs discriminating the cluster of strains. Maximum parsimony tree based on the 9,170 SNPs identified through the mapping of 87 French M. bovis sequences on AF2122/97 reference sequence created using MEGA4 (Tamura et al., 2007). Numbers indicated on the branches represent the numbers of SNP. The tree is subdivided in nine main clusters described in the text.