Table 1.

Summary of Roizmanbacteria and Woesebacteria genomes reconstructed in this study.

Clade	Group	Genome name	Genome size (kbp)	No. of scaffolds	CG%	Bacterial 50 SCGs		No. of proteins	CRISPR-Cas systems	Prophage
						Completeness	Contamination
		QZM_B4_Woesebacteria_36_36∗	621.6	41	35.66	50/50	0	706	CasY	No
Clade 1	1 (Cl-Gpl)	GD2_1_Roizmanbacteria_31_27∗	561.5	98	30.77	41/50	1/50	589	CasY	No
		QZM_A2_2_Roizmanbacteria_31_61∗	895.7	74	31.00	43/50	0	775	CasY	No
	2 (Cl-Gp2)	QZM_A1_Roizmanbacteria_31_22	753.1	62	30.72	39/50	1/50	678
		QZM_A2_1_Roizmanbacteria_31_42	775.1	213	30.87	45/50	0	897
		QZM_A2_3_Roizmanbacteria_31_19	500.3	126	30.74	27/50	2/50	588
Clade2	3 (C2-Gp3)	QZM_B3_Roizmanbacteria_33_70∗	994.5	17	33.41	41/50	0	985	Type lll-A (degenerate)	Yes
		QZM_A1_Roizmanbacteria_33_14	822.0	125	33.30	40/50	1/50	978
		QZM_A2_Roizmanbacteria_33_14	860.2	109	33.24	45/50	2/50	1020
		QZM_A2_2_Roizmanbacteria_33_18	711.6	184	32.85	35/50	3/50	939
	4 (C2-Gp4)	DGJ11_Roizmanbacteria_31_22∗	655.0	139	31.23	40/50	3/50	779	CasY + Type II l-A	No
	5 (C2-Gp5)	GD2_l_Roizmanbacteria_32_73∗	906.7	20	32.28	45/50	2/50	946	CasY + Type lll-A + Type l-B	No
		QZM_Bl_Roizmanbacteria_33_36∗	816.6	133	33.15	43/50	2/50	948		No
	6 (C2-Gp6)	QZM_A1_Roizmanbacteria_33_28	647.1	82	33.16	42/50	3/50	740	CasY + Type III-A
		QZM_A2__Roizmanbacteria_33_40	645.2	208	33.37	38/50	4/50	835
		QZM_A2_2_Roizmanbacteria_33_54	792.5	150	32.83	36/50	3/50	947
	7 (C2-Gp7)	QZM_B4_Roizmanbacteria_33_372∗	891.6	13	33.22	46/50	0	919	CasY + Type lll-A + Type l-B	No

^∗Representative genome of each group used in phylogenetic analyses. Figure 1 and Supplementary Figure S1 provide phylogeny and clade information.