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. 2019 May 1;20(Suppl 7):196. doi: 10.1186/s12859-019-2733-5

Table 4.

The most significant GO BPs only enriched in our method

GO ID Name P value Module ID
GSE31684
GO:0043547 positive regulation of GTPase activity 3.59e-06 4
GO:0036336 dendritic cell migration 7.73e-06 4
GO:0043087 regulation of GTPase activity 2.89e-05 4
GO:0006929 substrate-dependent cell migration 9.66e-05 13
GO:0070232 regulation of T cell apoptotic process 1.07e-04 4
GSE54002
GO:0000082 G1/S transition of mitotic cell cycle 1.27e-07 6
GO:0031109 microtubule polymerization or depolymerization 7.13e-07 6
GO:0000083 regulation of transcription involved in 8.48e-07 6
G1/S transition of mitotic cell cycle
GO:0007019 microtubule depolymerization 6.00e-06 6
GO:0051783 regulation of nuclear division 7.21e-06 6
GSE102484
GO:0050766 positive regulation of phagocytosis 1.70e-06 1
GO:0006271 DNA strand elongation involved in DNA replication 1.95e-06 10
GO:0022616 DNA strand elongation 1.95e-06 10
GO:0050764 regulation of phagocytosis 3.18e-06 1
GO:0070374 positive regulation of ERK1 and ERK2 cascade 8.79e-06 1

P value cutoff = 0.01