Table 4.
The candidate lncRNAs associated with stomach cancer, lung cancer and colon cancer.
| Disease name | Rank | LncRNA name | Description | Rank | LncRNA name | Description |
|---|---|---|---|---|---|---|
| Stomachcancer | 1 | XIST | LncRNADisease, Lnc2Cancer | 9 | HULC | LncRNADisease, Lnc2Cancer |
| 2 | NEAT1 | LncRNADisease, Lnc2Cancer | 10 | PCAT1 | Lnc2Cancer | |
| 3 | SOX2-OT | Lnc2Cancer | 11 | HOTTIP | LncRNADisease, Lnc2Cancer | |
| 4 | CCAT2 | LncRNADisease, Lnc2Cancer | 12 | KCNQ1OT1 | literature1 Sun et al., 2018 | |
| 5 | TUG1 | LncRNADisease, Lnc2Cancer | 13 | WT1-AS | LncRNADisease, Lnc2Cancer | |
| 6 | MALAT1 | LncRNADisease, Lnc2Cancer | 14 | NPTN-IT1 | miRCancer, StarBase | |
| 7 | BCYRN1 | Lnc2Cancer | 15 | MIR17HG | literature1 Bahari et al., 2015 | |
| 8 | HCP5 | literature2 Mo et al., 2018 | ||||
| Lung cancer | 1 | HOTTIP | LncRNADisease, Lnc2Cancer | 9 | LINC00663 | Lnc2Cancer |
| 2 | PCA3 | unconfirmed | 10 | SOX2-OT | LncRNADisease | |
| 3 | LINC00675 | unconfirmed | 11 | MIAT | Lnc2Cancer | |
| 4 | HULC | literature1Zhang et al., 2016 | 12 | LINC00312 | Lnc2Cancer | |
| 5 | KCNQ1OT1 | Lnc2Cancer | 13 | TINCR | Lnc2Cancer | |
| 6 | SNHG12 | Lnc2Cancer | 14 | LINC00961 | Lnc2Cancer | |
| 7 | CBR3-AS1 | miRCancer, StarBase | 15 | GHET1 | Lnc2Cancer | |
| 8 | TUSC7 | Lnc2Cancer | ||||
| Colon cancer | 1 | PVT1 | Lnc2Cancer | 9 | SNHG4 | miRCancer, StarBase |
| 2 | UCA1 | LncRNADisease, Lnc2Cancer | 10 | SPRY4-IT1 | literature1 Shen et al., 2017 | |
| 3 | NEAT1 | Lnc2Cancer | 11 | BANCR | Lnc2Cancer | |
| 4 | WT1-AS | Lnc2Cancer | 12 | HULC | Lnc2Cancer | |
| 5 | CDKN2B-AS1 | Lnc2Cancer | 13 | LSINCT5 | Lnc2Cancer | |
| 6 | BCYRN1 | literature1 Gu et al., 2018 | 14 | KCNQ1OT1 | Lnc2Cancer | |
| 7 | GAS5 | Lnc2Cancer | 15 | HNF1A-AS1 | Lnc2Cancer | |
| 8 | HOTAIRM1 | Lnc2Cancer |
(1) “Lnc2Cancer” and “LncRNADisease” are manually curated database. (2) “literature1” means that published literature supports that dysregulation of the lncRNA in cancer. (3) “literature2”or “miRCancer, StarBase” means that the lncRNA is related to some important factors affecting the development of the cancer.