Table 6.
Mapped to | KEGG | Unique | Exclusive | ||||
---|---|---|---|---|---|---|---|
Kind | Size | KEGG | orthology IDs | Pathways | Reactions | reactions | reaction IDs |
Core | 2503 | 1576 | 1260 | 108 | 1381 | 891 | 786 |
Dispensable | 1032 | 191 | 159 | 58 | 153 | 135 | 30 |
Accessory | 651 | 126 | 107 | 42 | 106 | 97 | 27 |
Unique | 381 | 65 | 61 | 37 | 47 | 42 | 1 |
1DuctApe derived genome analysis statistics, the exclusive reaction indicated is reaction 3.2.1.122 only detected in strain N2306. Only half of the genes of each genome were mapped to KEGG. Genes found in all strains are described as “core,” the other “dispensable”: Dispensable genome is further divided into “accessory,” when a gene is present in at least two strains, and “unique,” when a gene is present in exactly one strain.