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. 2019 May 10;14(5):e0216222. doi: 10.1371/journal.pone.0216222

Table 2. Multi-variant, pleiotropy robust MR methods.

Method Robust to pleiotropy by … CHD Causal OR (95% CI) MI Causal OR (95% CI)
MR Egger Intercept-based adjustment for global effect of pleiotropy 0.98 (0.70, 1.39) 0.89 (0.63, 1.26)
Weighted MBE (phi = 1) Assuming causal effect is most common shared effect across variants 1.09 (0.89, 1.33) 0.98 (0.79, 1.21)
Weighted Median Assuming most (≥ 50%) genetic instruments are unaffected by pleiotropy 1.12 (0.91, 1.37) 1.03 (0.82, 1.29)
MR PRESSO Assuming <50% of genetic instruments have horizontal pleiotropy 1.18 (0.98, 1.42) 1.17 (0.98, 1.40)

To further examine potential effects of pleiotropy we ran several multi-variant, pleiotropy robust models including MR Egger, Weighted Mode Based Estimator (MBE), Weighted Median, and MR PRESSO. Each uses a different means to account for pleiotropy and has different assumptions used to estimate the causal effect in the presence of pleiotropy. Odds ratios are per 1 g/L increase in genetically determined fibrinogen. CHD = coronary heart disease; CI = confidence interval; MI = myocardial infarction; MR = mendelian randomization