Bicistronic constructs expressing the CypA mutants shown in
Figure 3A followed by an IRES-regulated eGFP-ubiquitin-neomycin fusion protein were used to transduce Huh7.5-shRNA CypA cells. Transduction efficiency assessed via flow cytometry and representative data are summarized here from one set of transductions (
A). Cell lysates were collected from Huh7.5-shRNA CypA cells transduced with these various constructs and expression determined by western blot (please see
Supplementary file 1). Quantification of CypA expression was determined by taking the signal from the CypA band divided by the signal from the β-actin band and then this value divided by that from the untransduced Huh7.5-shRNA CypA cells to give the relative expression (
B). Signal intensity was determined using LI-COR Image Studio Software (version 4.0) with background detection set to ‘Lane.’ The ‘a’ and ‘b’ above each bar delineate the different pairs of antibodies used to assess CypA expression. For ‘a,’ the signal was quantified from rabbit anti-CypA and mouse anti-β-actin; for ‘b,’ the signal was quantified from mouse anti CypA and rabbit anti- β-actin.