Table 3.
Articles, crops, number of samples, tissue and sample description (control vs treatment) included in the analysis
| Articles | Crops | No. of Samples | Tissue | Sample Description | Duration of stress | |
|---|---|---|---|---|---|---|
| Control | Treated | |||||
| Clauw et al. (2015) | Arabidopsis thaliana | 6 | Seedling leaves | Control1 (ERR754071) Control2 (ERR754083) Control3 (ERR754090) | Treated1 (ERR754061) Treated1 (ERR754065) Treated3 (ERR754082) | The third seedling leaves were harvested at 10 DAS (Days after stress) |
| Song et al. (2016) |
Zea mays
cv. B73 (Study1) |
2 | Mature leaves | Control (SRR4054956) | Treated (SRR4048280) | Leaves were collected after 15 DAS |
| Corso et al. (2015) |
Vitis vinifera
cv. M4 |
4 | Young leaves | Control1 (SAMN02393571) Control2 (SAMN02393572) |
Treated1 (SAMN02393596) Treated2 (SAMN02393595) |
Leaves were collected after 10 DAS |
| Li et al. (2017) |
Zea Mays
cv. B73 (Study 2) |
4 | Mature leaves | Control1 (SRR3984708)Control2 (SRR3984749) | Drought1 (SRR3984782) Drought2 (SRR3984791) |
Plant were grown without watering until their third leaves were fully expanded |
| Pieczynski et al. (2018) |
Solanum tuberosum
cv. Gwiazda |
10 | Mature leaves | Gwiazda_D0_1 (SRR5448182)Gwiazda_D0_2 (SRR5448183) Gwiazda_D0_3 (SRR5448184) |
Gwiazda_D6_1 (SRR5448185) Gwiazda_D6_2 (SRR5448186) Gwiazda_D6_3 (SRR5448187) Gwiazda_D10_1 (SRR5448188) Gwiazda_D10_2 (SRR5448189, SRR5448190) Gwiazda_D10_3 (SRR5448191) |
Leaves were collected after 6 DAS and 10 DAS |
| Orcheski et al. (2016) | Malus X domestica | 4 | Seedling leaves | WR1 (SRR3160181) WR2 (SRR3160208) |
PR1 (SRR3160081) PR2 (SRR3160180) |
Seedling leaves were harvested after 14 days |
| Liu et al. (2017) |
Solanum lycopersicum
cv. M82 |
4 | Seedling leaves | SCK (SRR5282480) TCK (SRR5282476) |
SD (SRR5282481) TD (SRR5282478) |
The third seedling leaves were harvested at 10 DAS (Days after stress) |
| Salman et al. (2016) |
Vitis vinifera
cv. Summer Black |
2 | Mature leaves | Control (SRR3466603) | Treated (SRR3466604) | Mature leaves were collected with the interval of 5 days from 0 to 20 days |
| Liu et al. (2015) |
Triticum aestivum
cv. TAM107 |
6 | Mature leaves | Control1 (SRR1542404) Control2 (SRR1542405) |
Treated1 (SRR1542406) Treated2 (SRR1542407) Treated3 (SRR1542408) Treated 4 (SRR1542409) |
Leaves were collected at 6 h after stress |