Table 3:
NCBI BLAST analysis of P. falciparum msp-1 and msp-2 DNA genotyping results from the freeze thaw samples
| Sample | Allele size (bp) | BLASTN highest homology, GenBank description | E value | % Nucleotide identity | % query coverage |
|---|---|---|---|---|---|
| D4 | 801 | XM_001349542.1 Plasmodium falciparum 3D7 merozoite surface protein 2 precursor (MSP2) mRNA, complete cds | 7e–158 | 96 | 84 |
| F1 | 741 | JX885915.1 - Plasmodium falciparum isolate TAB127 merozoite surface protein 2 (MSP2) gene, partial cds | 6e–168 | 99 | 91 |
| K2 | 401 | HM568594.1- Plasmodium falciparum isolate 287 merozoite surface protein-1 (MSP-1) gene, partial cds | 1e–93 | 98 | 49 |
| M2 | 232 | HM153228.1 Plasmodium falciparum isolate 2/044-1-2 merozoite surface protein 1 (msp1) gene, partial cds | 4e–46 | 98 | 95 |
NCBI = National Center for Biotechnology Information; BLAST = basic local alignment search tool; msp = merozoite surface protein 1; bp = basepairs.