| E-MTAB-3732 |
A comprehensive human expression map |
transcription profiling by array |
27,871 |
| E-MTAB-5214 |
RNA-seq from 53 human tissue samples from the Genotype-Tissue Expression (GTEx) Project |
RNA-seq of coding RNA |
18,879 |
| E-TABM-185 |
Transcription profiling by array of integrated human experiments involving the hgu133a platform to investigate a global map of human gene expression |
transcription profiling by array |
5,896 |
| E-MTAB-62 |
Human gene expression atlas of 5372 samples representing 369 different cell and tissue types, disease states and cell lines |
transcription profiling by array |
5,372 |
| E-MTAB-2919 |
RNA-seq from 53 human tissue samples from the Genotype-Tissue Expression (GTEx) Project |
RNA-seq of coding RNA, RNA-seq of non coding RNA |
3,282 |
| E-MTAB-2914 |
Cross-laboratory validation of the OncoScan FFPE Assay, a multiplex tool for whole genome tumour profiling |
genotyping by array |
972 |
| E-MTAB-37 |
Transcriptomics for Cancer Cell Line Project |
transcription profiling by array |
950 |
| E-MTAB-2770 |
RNA-seq of 934 human cancer cell lines from the Cancer Cell Line Encyclopedia |
RNA-seq of coding RNA |
934 |
| E-MTAB-38 |
Genotyping of human cancer cell lines |
genotyping by array |
676 |
| E-MTAB-2706 |
RNA-seq of 675 commonly used human cancer cell lines |
RNA-seq of coding RNA |
675 |
| E-MTAB-3983 |
Sanger Genomics of Drug Sensitivity in Cancer Project (GDSC) RNA-seq cancer cell line gene expression data |
RNA-seq of coding RNA |
462 |
| E-MTAB-6131 |
Methylation array for Multi-omics molecular profiling of primary prostate adenocarcinoma |
methylation profiling by array |
390 |
| E-AFMX-5 |
Transcription profiling of human cell lines and tissues (GNF/Novartis) |
transcription profiling by array |
316 |
| E-TABM-970 |
Transcription profiling by array of human normal tissues |
microRNA profiling by array |
274 |
| E-TABM-969 |
Transcription profiling by array of human normal tissues |
microRNA profiling by array |
255 |
| E-TABM-47 |
MicroRNA profiling of human normal lung and lung cancer samples to investigate the role of miRNA involvement in lung carcinogenesis |
microRNA profiling by array |
246 |
| E-MEXP-113 |
Transcription profiling of multiple human tumour specimens of different anatomical origin arrayed against a common reference |
transcription profiling by array |
242 |
| E-MTAB-2980 |
RNA-seq of 39 human cancer cell lines that are in the NCI-60 set from the Cancer Cell Line Encyclopedia |
RNA-seq of coding RNA |
217 |
| E-MTAB-6411 |
Short Tandem Repeats - Targeted-Sequencing of human cells for Lineage tracing |
genotyping by high throughput sequencing |
210 |
| E-MTAB-3397 |
MiRNA profiles in Lymphoblastoid Cell Lines of Finnish Prostate Cancer Families |
microRNA profiling by array |
193 |
| E-TABM-184 |
MicroRNA profiling of human cancer samples identifies ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas |
microRNA profiling by array |
193 |
| E-MTAB-1041 |
Transcription profiling by array of human prostate cancer samples in order to examine the changes in gene transcription underlying the aberrant citrate and choline metabolism |
transcription profiling by array |
168 |
| E-TABM-145 |
Transcription profiling of human cell lines and tissues - Luscombe re-analysis of GNF/Novartis data |
|
158 |
| E-MTAB-6128 |
Expression array for Multi-omics molecular profiling of primary prostate adenocarcinoma |
transcription profiling by array |
141 |
| E-MTAB-6126 |
SNP array for Multi-omics molecular profiling of primary prostate adenocarcinoma |
genotyping by array |
132 |
| E-MTAB-3222 |
Cancers of unknown primary (CUP) are characterized by chromosomal instability (CIN) compared to metastasis of know origin |
transcription profiling by array |
129 |
| E-TABM-26 |
Transcription profiling of human prostate tissues obtained from multiple Institutions |
transcription profiling by array |
114 |
| E-SMDB-2486 |
Transcription profiling of 2 primary human prostate tumors, 41 normal prostate specimens and nine lymph node metastases, |
transcription profiling by array |
112 |
| E-TABM-90 |
Transcription profiling by array of human lymphocytes from prostate carcinoma patients after X-radiation treatment |
transcription profiling by array |
108 |
| E-TABM-794 |
Transcription profiling of human prostate cancer |
transcription profiling by array |
102 |
| E-TABM-1202 |
Transcriptional profiling by array of primary rhabdomyosarcoma samples with different PAX3/FOXO1 fusion gene status |
transcription profiling by array |
101 |
| E-TABM-1135 |
MicroRNA profiling by array of human cancers to identify cancers with unknown primary tissue-of-origin |
microRNA profiling by array |
101 |
| E-MTAB-2523 |
Next-Generation Sequencing of RNA Isolated from Paired Fresh-Frozen and Formalin-Fixed Paraffin-Embedded Samples of Human Cancer and Normal Tissue |
DNA-seq, RNA-seq of coding RNA |
86 |
| E-MEXP-1327 |
Transcription profiling of human prostate cancer cells, normal epithelial prostatic cells and stroma cells from patients in placebo, selenium, vitamin E or selenium and vitamin E treatment groups |
transcription profiling by array |
85 |
| E-MEXP-1243 |
Transcription profiling by array of human prostate from patients with a previous diagnosis of Prostatic Intraepithelial Neoplasia and following consumption of high glucosinolate broccoli or peas to investigate interactions with the GSTM1 genotype |
transcription profiling by array |
81 |
| E-TABM-948 |
Transcription profiling of human hypoxia-stimulated prostate tumor cell lines and primary prostate epithelial cells |
transcription profiling by array |
73 |
| E-MTAB-2968 |
Androgen stimulation time-course of TMPRSS2-ERG fusion positive VCaP cells |
transcription profiling by array |
72 |
| E-MTAB-327 |
MicroRNA profiling by array of NCI-60 human cancer cell-lines |
microRNA profiling by array |
72 |
| E-MEXP-1029 |
MicroRNA profiling of the NCI-60 panel of human cancer cell lines |
microRNA profiling by array |
72 |
| E-MTAB-6127 |
SNP array Multi-omics molecular profiling of primary prostate adenocarcinoma |
genotyping by array |
66 |
| E-TABM-49 |
MicroRNA profiling of human normal prostate and prostate cancer samples to investigate the role of miRNA involvement in prostate carcinogenesis |
microRNA profiling by array |
63 |
| E-PROT-2 |
Proteomic profiling of NCI60 cell lines from Cancer Cell Line Encyclopedia |
proteomic profiling by mass spectrometer |
60 |
| E-TABM-65 |
Comparative genomic hybridization of cell lines from 9 different cancer tissue of origin types (Breast, Central Nervous System, Colon, Leukemia, Melanoma, Non-Small Cell Lung, Ovarian, Prostate, Renal) from NCI-60 panel |
comparative genomic hybridization by array |
60 |
| E-MTAB-567 |
RNA-seq of prostate cancer and adjacent normal tissues from 14 patients |
RNA-seq of coding RNA |
56 |
| E-MTAB-408 |
miRNA expression profiling of prostate cancer |
microRNA profiling by array |
54 |
| E-MTAB-2964 |
Methylation profiling blood, adjacent benign and multiple discrete tumour samples from locally advanced prostate cancers |
methylation profiling by array |
48 |
| E-MTAB-513 |
RNA-Seq of human individual tissues and mixture of 16 tissues (Illumina Body Map) |
RNA-seq of coding RNA |
48 |
| E-MEXP-2906 |
Transcription profiling by array of human prostate cells treated with sodium selenite or 5-2-deoxycytidine |
transcription profiling by array |
48 |
| E-MTAB-4519 |
Analysis of transcriptomes from 21 tissues, 13 melanoma samples and 7 breast cancer cell lines, enriched for transcripts from haploblocks with intronic and intergenic GWAS SNPs |
RNA-seq of coding RNA |
41 |
| E-TABM-50 |
MicroRNA profiling of human normal stomach and gastric cancer samples to investigate the role of miRNA involvement in stomach carcinogenesis |
microRNA profiling by array |
41 |
| E-MEXP-3005 |
metastatic signature is present in primary prostate tumor |
transcription profiling by array |
40 |
| E-MEXP-2602 |
MicroRNA profiling by array of mouse prostate cancer cell lines treated with dihydrotestosterone and prostate xenografts in intact or castrated mice |
transcription profiling by array |
40 |
| E-MEXP-2034 |
Transcription profiling by array of human primary prostate epithelial and stromal cells after treatment with 4-methylsulphinylbutyl and 3-methylsulphinypropyl isothiocyanates |
transcription profiling by array |
40 |
| E-MTAB-3715 |
Context dependent regulatory patterns of the androgen receptor and androgen receptor target genes |
transcription profiling by array |
39 |
| E-TABM-626 |
Kinase activity profiling shows osteoblast-induced EGFR/ERBB2 signaling in human androgen-sensitive prostate carcinoma cells |
transcription profiling by array |
39 |
| E-MTAB-4858 |
Microarray analysis of Du145, PC3 and LNCaP human prostate cancer cell lines |
transcription profiling by tiling array |
36 |
| E-MEXP-2966 |
The purpose of the experiment was to study miRNA expression in prostate cancer cell lines and xenografts and to combine it with miRNA gene copy number data that we already had to identify miRNAs that could be overexpressed or underexpressed as a consequence of amplification or deletion of the miRNA gene, respectively |
transcription profiling by array |
36 |
| E-MEXP-993 |
Transcription profiling by array of human prostate cancer stem cells |
transcription profiling by array |
36 |
| E-MEXP-3640 |
Transcription profiling by array of cancerous and non-cancerous human prostate cell lines treated with PY-ITC or sulforaphane in the presence and absence of the PI3K inhibitor LY294002 |
transcription profiling by array |
35 |
| E-MEXP-1331 |
Transcription profiling of normal, tumor and pure stromal tissue samples from patients with prostate adenocarcinoma, together with 4 cell lines |
transcription profiling by array |
35 |
| E-MEXP-3020 |
Low Dose PDT - Human Cells |
transcription profiling by array |
32 |
| E-MEXP-2286 |
Transcription profiling of human prostate cancer cells over-expressing androgen receptor following dihydrotestosterone treament |
|
32 |
| E-MEXP-3530 |
MicroRNA profiling by array of prostate after goserelin and bicalutamide treatments |
microRNA profiling by array |
28 |
| E-MEXP-3081 |
Transcription profiling by array of human prostate cancer samples after treatment with bicalutamide (antiandrogen) or goserelin (GnRH agonist) |
transcription profiling by array |
28 |
| E-MEXP-1058 |
MicroRNA profiling of human prostate cancer cell lines, xenografts and tumor samples |
microRNA profiling by array |
28 |
| E-MTAB-6062 |
Transcription profiling of irradiated non-adherent anoikis-resistant DU145 and MCF-7 cells and 5-azacytidine-treated non-adherent anoikis-resistant HeLa cells in contrast to control (non-irradiated, non-treated) cells |
transcription profiling by array |
26 |
| E-SMDB-3636 |
Transcription profiling of human androgen receptor expressing prostate carcinoma cell line LNCaP and normal human foreskin fibroblasts expressing the androgen receptor treated with dihydrotestosterone (DHT), ethanol, or untreated vs. a common reference, see E-SMDB-3637 |
transcription profiling by array |
26 |
| E-MTAB-4869 |
Transcription profiling of IGR-CaP1 prostate cancer cells resistant to docetaxel compared to non-resistant cells |
transcription profiling by array |
24 |
| E-MTAB-4753 |
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells |
methylation profiling by array |
24 |
| E-SMDB-3637 |
Transcription profiling of human androgen receptor expressing prostate carcinoma cell line LNCaP and normal human foreskin fibroblasts expressing the androgen receptor treated with dihydrotestosterone (DHT), ethanol, or untreated vs. a common reference, see E-SMDB-3636 |
transcription profiling by array |
24 |
| E-MTAB-5121 |
The role of the transcription factors GATA2 and FOXA1 in immortalized basal-like prostate epithelial cells |
transcription profiling by array |
23 |
| E-MTAB-3438 |
Transcription profiling of effected genes by compound BIO,3G4 and knockdown of MED23 |
transcription profiling by array |
23 |
| E-MEXP-2313 |
miRNA profiling of human prostate cancer cell lines treated with 5azadC and TSA to investigate epigenetic modifications |
microRNA profiling by array |
22 |
| E-MTAB-1572 |
Proteomic profiling by array of prostate cancer tumor samples with different sensitivities to androgen deprivation and under different severities of hypoxia |
proteomic profiling by array |
21 |
| E-SMDB-3867 |
Transcription profiling of human prostatic stromal cells cultured from diseased vs. normal tissues |
transcription profiling by array |
19 |
| E-MEXP-335 |
Comparative genomic hybridization of 5 human prostate cancer cell lines and 13 prostate cancer xenografts to create genomic profiles of copy number alterations |
comparative genomic hybridization by array |
19 |
| E-MTAB-5021 |
Transcriptional differences between the peripheral and the transcription zone of the prostate |
RNA-seq of coding RNA |
18 |
| E-MTAB-3691 |
Differential Ago-RIP-Seq for the identification of miR-375 targets in prostate cancer cells |
RIP-seq |
18 |
| E-MTAB-3421 |
Knockdown of DHRS7 in the human prostate cancer cell line LNCaP |
transcription profiling by array |
18 |
| E-MTAB-1521 |
Transcription profiling by array of human prostate cancer cell lines to investigate drug targeting of the IL6/STAT3 pathway |
transcription profiling by array |
16 |
| E-MTAB-986 |
ChIP-seq study using a cell line model of ER_ AR+ molecular apocrine tumours (AR_FoxA1_molecular_apocrine) |
ChIP-seq |
16 |
| E-MTAB-4966 |
Expression profiling of a prostate cancer cell line(OPCT1) and its clonal progenies with different functional characteristics |
transcription profiling by array |
15 |
| E-TABM-532 |
Transcription profiling of human prostate carcinoma cell line PC3 treated with reverse transcriptase inhibitor abacavir |
transcription profiling by array |
15 |
| E-TABM-1049 |
Transcription profiling by array of human prostate cancer cells treated with monensin to investigate the effect on apoptosis induction and oxidative stress |
|
14 |
| E-MEXP-2319 |
MicroRNA profiling of human prostate cancer |
microRNA profiling by array |
13 |
| E-MEXP-520 |
Methylation profiling in various human cell lines and tissues by mDIP - methylated DNA precipitation with antibodies against methylated cytosine |
methylation profiling by array |
13 |
| E-MTAB-5102 |
Development of a small molecule for treatment of castration resistant prostate cancer via androgen receptor and IL6/STAT3 pathways |
transcription profiling by array |
12 |
| E-MTAB-3730 |
Transcriptome profiling after CBX7 knockdown in LNCaP cells |
transcription profiling by array |
12 |
| E-MTAB-4752 |
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells |
RNA-seq of coding RNA |
12 |
| E-MTAB-2838 |
IGR_JUNCONCO_STUDY_LM |
transcription profiling by array |
12 |
| E-MTAB-1749 |
ChIP-seq of human LNCaP prostate cancer cell line and MDA-MB-453 molecular apocrine breast cancer cell line with antibodies against androgen receptor (AR) with or without overexpression of FoxA1 |
ChIP-seq |
12 |
| E-MTAB-1221 |
Transcription profling by array of Docetaxel resistant human prostate cancer cell lines established by exposure to different doses of Docetaxel |
transcription profiling by array |
12 |
| E-SMDB-6 |
Transcription profiling of HPEC senescent vs. immortalized cells |
transcription profiling by array |
12 |
| E-MTAB-773 |
Transcriptional profiling of PC-3 human prostate cancer cells in response to caffeic acid phenethyl ester treatment |
transcription profiling by array |
12 |
| E-SMDB-3259 |
Transcription profiling of human prostate cancer cells treated with resveratrol |
transcription profiling by array |
12 |
| E-MEXP-336 |
Transcription profiling of four human prostate cancer cell lines and seven prostate cancer xenografts |
transcription profiling by array |
11 |
| E-MTAB-108 |
Transcription profiling by array of human LNCaP cells transfected with GFP-FOXP3 cDNA |
transcription profiling by array |
10 |
| E-MEXP-461 |
Transcription profiling of human Ki-ras transformed embryo prostate epithelial cells (267B1) to identify mRNAs under differential translational control |
transcription profiling by array |
10 |
| E-SMDB-3938 |
Transcription profiling of human prostate cancer cells (LNCaP) treated with selenomethionine or methylselenic acid |
transcription profiling by array |
10 |
| E-MEXP-476 |
Transcription profiling of CD146 immunomagnetically enriched circulating endothelial cells (CECs) from healthy donors and patients with metastatic breast, colorectal, prostate, lung and renal cancer |
transcription profiling by array |
10 |
| E-SMDB-2030 |
Transcription profiling of prostate cancer cells with Akt activation |
transcription profiling by array |
9 |
| E-MTAB-2142 |
Transcription profiling by array of the compound U0126 in PC3 prostate cancer cells |
transcription profiling by array |
8 |
| E-MTAB-1204 |
ChIP-seq of human cells from a primary prostate cancer with poor outcome and metastatic LNCaP cells in basal condition and after 17b-Estradiol (E2) treatment |
ChIP-seq |
8 |
| E-TABM-1172 |
Transcription profiling by array of human VCaP prostate cancer cell line after PLA2G7 siRNA treatment |
transcription profiling by array |
8 |
| E-TABM-949 |
Transcription profiling by array of human prostate carcinoma cells during a stepwise epithelial to mesenchymal transition |
transcription profiling by array |
8 |
| E-TABM-635 |
Chromatin immunoprecipitation of human prostate cell lines indicates an H3K4me3/H3K27me3 epigenetic signature of prostate carcinogenesis |
ChIP-chip by array |
8 |
| E-MEXP-803 |
Comparative genomic hybridization of benign epithelial and prostate cancer cell lines derived from the same patient |
comparative genomic hybridization by array |
8 |
| E-SMDB-2973 |
Transcription profiling and comparative genomic hybridization of prostate cancer cell lines |
transcription profiling by array |
8 |
| E-SMDB-2972 |
Transcription profiling and comparative genomic hybridization of prostate cancer cell lines |
transcription profiling by array |
8 |
| E-MTAB-5150 |
3prime RNA-seq of human prostate cancer cell line DU-145 treated with Senexin A |
RNA-seq of coding RNA |
6 |
| E-MTAB-845 |
Transcription profiling by array of human DU145 cells treated with small molecule MS0019266 |
transcription profiling by array |
6 |
| E-SMDB-4028 |
Transcription profiling of human prostate cancer cell lines after androgen depletion and AR knock-down |
transcription profiling by array |
6 |
| E-MEXP-136 |
Transcription profiling of circulating tumor cells (CTC) from peripheral blood from patients with breast and prostate cancer |
transcription profiling by array |
6 |
| E-MTAB-4118 |
Controls and CNTN1 overexpression in DU145 cells and CNTN1 knockdown in DU145 cell-derived prostate cancer stem-like cells |
transcription profiling by array |
4 |
| E-MTAB-1786 |
Transcription profiling by array of castration-resistant prostate cancer PC-3 cells treated with Hsp27-siRNA or control siRNA to study the role of Heat shock protein (Hsp) 27 in splicing |
transcription profiling by array |
4 |
| E-MEXP-2943 |
Searching targets for miR-32 and miR-148a |
microRNA profiling by array |
4 |
| E-MEXP-581 |
Transcription profiling of human PC3 prostate cells transfected with FGF-8b vs. control vector |
|
4 |
| E-MEXP-2172 |
Transcription profiling by array of human DU-145 and PC-3MM2 cells after gamma irradiation |
transcription profiling by array |
4 |
| E-TABM-78 |
Transcription profiling of neuroendocrine-like LNCaP-cells |
transcription profiling by array |
4 |
| E-SMDB-3416 |
Transcription profiling of 4 prostate cancer cell lines treated with the DNA methyltransferase inhibitor 5-aza-dC |
transcription profiling by array |
4 |
| E-MTAB-3504 |
Integrated and functional genomics analysis validates the relevance of the nuclear variant ErbB380kDa in prostate cancer progression |
ChIP-chip by array |
3 |
| E-MTAB-3499 |
Integrated and functional genomics analysis validates the relevance of the nuclear variant ErbB380kDa in prostate cancer progression |
ChIP-chip by array |
3 |
| E-MTAB-3087 |
Comparative MicroRNA Expression Profiles of Penile Cancer Revealed by Next-Generation Small RNA Deep Sequencing |
microRNA profiling by high-throughput sequencing |
2 |
| E-MEXP-1585 |
Chromatin immunoprecipitation of trimethylated histone H3-K27 in human prostate cancer cell line PC3 |
ChIP-chip by array |
2 |
| E-MEXP-1581 |
RNAi knock-down of EZH2 in mouse prostate cancer cell line PC3 |
RNAi profiling by array |
2 |
| E-MEXP-1627 |
Transcription profiling of human PC-3 prostate cancer cells expressing shTCEB1 leading to TCEB1 silencing |
transcription profiling by array |
1 |
