Skip to main content
. 2019 May 13;28(6):1115–1126. doi: 10.1002/pro.3628

Table 3.

Statistics From the RALF8 Structure Calculationsa

Considered regions 1–56 21–29 41–47
Distance constraints
Short range |(i − j)| ≤ 1 832 123 124
Medium range 1 < |(i − j) | < 5 66 31 23
Long range |(i − j)| ≥ 5 16 12 4
Total 914 166 151
Dihedral angle constraints
φ 10 7 2
ψ 10 7 2
Total 20 14 4
Average RMSD to the representative coordinates
Backbone heavy atoms N, Cα, Cβ, and Co 12.81 ± 2.47 0.55 ± 0.28 0.70 ± 0.37
All heavy atoms 12.93 ± 3.10 1.23 ± 0.25 0.77 ± 0.33
PROCHECK Z scores (φ and ψ/all) −3.11/–3.37 −1.06/–1.95 −4.52/–6.80
Ramachandran plot summary from PROCHECK (%)
Most favored 72.8 83.1 72
Additionally allowed 18.5 16.9 19
Generously allowed 5.7 0 8
Disallowed 3 0 1
MolProbity Clashscore/Z‐score 3.05/1.00
Ramachandran plot summary from MolProbity (%)
Most favored 83.4 100 67.1
Allowed 9.4 0 20
Disallowed 7.1 0 12.9
PONDEROSA pseudopotential E (kJ/mol) 2169.08 ± 44.93
Violations
Distance constraints [>0.5 Å] 0
Dihedral angle constraints [>5°] 0
van der Waals constraints [>0.2 Å] 0
a

Structural qualities for three different regions were evaluated using PSVS 1.5 (http://psvs‐1_5‐dev.nesg.org).