Table 1: Comparative accuracy of RGNs using dRMSD.
The average dRMSD (lower is better) achieved by RGNs and the top five servers at each CASP is shown for the novel folds (left) and known folds (right) categories. Numbers are based on common set of structures predicted by top 5 servers during each CASP. A different RGN was trained for each CASP, using the corresponding ProteinNet training set containing all sequences and structures available prior to the start of that CASP. See also Table S1–S3.
CASP7 | CASP8 | CASP9 | CASP10 | CASP11 | CASP12 | CASP7 | CASP8 | CASP9 | CASP10 | CASP11 | CASP12 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
RGN | 9.3 | 7.3 | 8.7 | 10.0 | 8.5 | 10.7 | 5.6 | 5.9 | 6.5 | 6.9 | 7.4 | 6.9 |
1st Server | 9.3 | 8.3 | 9.0 | 10.3 | 9.3 | 11.0 | 4.0 | 4.3 | 5.2 | 5.3 | 5.8 | 4.7 |
2nd Server | 9.9 | 8.6 | 9.1 | 10.6 | 9.6 | 11.2 | 4.0 | 4.6 | 5.2 | 5.4 | 6.0 | 4.8 |
3rd Server | 10.0 | 9.2 | 9.7 | 10.9 | 11.2 | 11.3 | 4.1 | 4.8 | 5.4 | 5.7 | 6.5 | 5.6 |
4th Server | 10.1 | 9.9 | 10.1 | 11.7 | 11.7 | 11.4 | 4.2 | 5.0 | 5.4 | 5.9 | 6.8 | 5.8 |
5th Server | 10.4 | 10.4 | 13.5 | 12.0 | 12.9 | 13.0 | 4.8 | 5.0 | 5.5 | 7.2 | 6.9 | 5.9 |