Table 1.
Variations of NY-99 to 2004Hou3. 1
| Nucleotide position | NY-99 nucleotide (amino acid) | 2004Hou3 nucleotide (amino acid) | Genome region |
|---|---|---|---|
| 660 | C (I) | U (I) | prM |
| 774 | U (T) | C (T) | prM |
| 1244 | G (R) | A (K) | E |
| 1442 | U (V) | C (A) | E |
| 1465 | C (L) | U (F) | E |
| 1797 | C (N) | U (N) | E |
| 1815 | G (S) | A (S) | E |
| 1997 | C (A) | U (V) | E |
| 2049 | U (F) | C (F) | E |
| 2253 | A (G) | G (G) | E |
| 2428 | G (V) | U (F) | E |
| 2466 | C (H) | U (H) | E |
| 4107 | C (A) | U (A) | NS2A |
| 4146 | A (L) | G (L) | NS2A |
| 4803 | C (R) | U (R) | NS3 |
| 5275 | C (L) | U (L) | NS3 |
| 5280 | G (A) | A (A) | NS3 |
| 5736 | C (C) | U (C) | NS3 |
| 6045 | C (H) | U (H) | NS3 |
| 6138 | C (F) | U (F) | NS3 |
| 6238 | C (L) | U (L) | NS3 |
| 6405 | U (D) | C (D) | NS3 |
| 6426 | C (H) | U (H) | NS3 |
| 6589 | A (R) | C (R) | NS4A |
| 6726 | C (V) | U (V) | NS4A |
| 6996 | C (F) | U (F) | NS4B |
| 7416 | C (P) | U (P) | NS4B |
| 7938 | U (G) | C (G) | NS5 |
| 7977 | A (E) | G (E) | NS5 |
| 8199 | C (H) | U (H) | NS5 |
| 8235 | U (C) | C (C) | NS5 |
| 8325 | C (S) | U (S) | NS5 |
| 8520 | G (K) | A (K) | NS5 |
| 8727 | U (T) | C (T) | NS5 |
| 8835 | G (A) | A (A) | NS5 |
| 8970 | U (D) | C (D) | NS5 |
| 9013 | C (L) | U (L) | NS5 |
| 9144 | C (F) | U (F) | NS5 |
| 9352 | C (L) | U (L) | NS5 |
| 10,338 | C (D) | U (D) | NS5 |
| 10,440 | A | G | 3’UTR |
| 10,496 | T | C | 3’UTR |
| 10,703 | G | A | 3’UTR |
1Table 1 Footnote: prM: precursor membrane protein, E: envelope protein, NS2A: nonstructural protein A, NS3: nonstructural protein 3 containing serine protease, RNA helicase, and NTPase, NS4A: nonstructural protein 4A, NS4B: nonstructural protein 4B, NS5: nonstructural protein 5 containing RNA-dependent RNA polymerase, and 3’UTR: 3’ untranslated region.