MDA	Multiple displacement amplification
WGA	Whole genome amplification
Phi29DNApol	Phi29 DNA polymerase
Chimeras	Chimeric sequence reads
SOAP2	Short Oligonucleotide Analysis Package 2
BWA	Burrows-Wheeler Aligner
SCMDA	Single cell multiple displacement amplification
Hg19	Human reference genome Feb. 2009 assembly
SRA	Sequence Read Archive
UCSC	University of California, Santa Cruz
NCBI	National Center for Biotechnology Information
B-Lymphocyte	Peripheral vein B-Lymphocyte
BJ, ATCC	BJ primary human foreskin fibroblast
HUVEC	Human umbilical vein endothelial cell
YH	YH lymphoblastoid cell line
BWA-MEM	Burrows-Wheeler Aligner-Maximal Exact Matches
SVs	Structural Variations