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. 2019 May 7;10:924. doi: 10.3389/fmicb.2019.00924

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Copyright © 2019 Fernández, Cabrera, Varadarajan, Lutz, Ledermann, Roschitzki, Eberl, Bedmar, Fischer, Pessi, Ahrens and Mesa.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Visualization of larger genomic changes in B. diazoefficiens strain 110spc4 (inner ring) compared to the USDA 110 NCBI reference genome (outer ring). Five insertions (2 through 6; red) and a large deletion region (1; blue) are shown (see Table 1). The bar chart shows the results of a Fisher's exact test for enrichment of COG categories annotated in 142 of 223 genes located in the 202 kb region of USDA 110 that is absent in strain 110spc4. Significant p-values are highlighted above each category (^*p-value < 0.01; ^**p-value < 0.001; ^***p-value < 0.00001). The percentages of genes (count of genes / total no. of genes) for each COG category (X-axis) from USDA 110 (gray) or from the 202 kb deletion region (blue) are shown on the Y-axis.