Table 1.
Reference and alternated sequences | Region of alteration | Alternate allele | Reference allele | |
---|---|---|---|---|
SNV |
ACTGTCGTG
ACTGACGTG |
[4, 5] | A | T |
Insertion a |
ACTG__TCGTG
ACTGACTCGTG |
[4, 4] | AC | (Empty) |
Deletion |
ACTGTCGTG
ACT____TG |
[3, 7] | (Empty) | GTCG |
Indel b |
ACTGTCGTG
ACCAA_GTG |
[2, 6] | CAA | TGTC |
Duplications are treated internally as a special type of insertion.
Inversions are treated internally as a special type of indel.