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. 2019 May 15;14(5):e0216546. doi: 10.1371/journal.pone.0216546

Table 1. Amino acids and positions within characterized AA5_2 sequences that are implicated in catalysis and substrate preference.

F. graminearum Corresponding amino acid in
Catagory Position Amino acid Reported function Reference(s) CgrRaOx CgrAlcOx PruAA5_2
Catalysis 194 F π-π interaction with F227 and W290 [39] F W Y
228 C C228-Y272 redox cofactor [3,5,40] C C C
272 Y C228-Y272 redox cofactor, copper ligand [3,5,40] Y Y Y
441 F π-π stacking interaction with Y495 [3] F F F
464 F π-π stacking interaction with Y495 [39] F F F
495 Y Catalytic tyrosine, copper ligand [3,5] Y Y Y
496 H Copper ligand [3,5] H H H
581 H Copper ligand [3,5] H H H
Substrate preference 290 W π-π stacking interaction with Y272 and F194, hydrogen bonding with D-galactose [3,5,16,34,4042] Y F W
326 Qa Hydrogen bonding with R330 [34,41] A G D
329 Y Hydrogen bonding with D-galactose and R330 [34] W M Y
330 R Bidentate hydrogen bonds with D-galactose [34,37,41] R F R
405 Y Hydrogen bonding with Y495 [37] Y Y Y
406 Qa Hydrogen bonding with D-galactose [34,37] S T E
Catalytic efficiency 383 Ca C383S increases Vmax on D-galactose by 1.75x and lowers KM by 3.6x [35,36] C C S
436 Ya Y436H increases Vmax on D-galactose by 2x [35] K Y A
494 Va V494A increases Vmax on D-galactose by 1.75x [35,36,41] N N V

Amino acid positions correspond to the archetypal galactose oxidase from Fusarium graminearum.

aAmino acids not fully conserved among AA5_2 sequences from other Fusarium species (Fig A in S1 File).