Table 1.
Force field | Polarization | Electrostatics | Coverage | Software | |||||
---|---|---|---|---|---|---|---|---|---|
Penetration | Anisotropy | Protein | DNA | RNA | Sugar | Lipid | |||
AMBER | Induced dipole |
N/A | N/A | Yes | Yes | Yes | No | No | AMBER |
AMOEBA | Induced dipole |
N/A | Multipole | Yes | Yes | Yes | No | Yes | TINKER, AMBER, OpenMM |
CHARMM-Drude | Drude | N/A | Distributed charges | Yes | Yes | No | Yes | Yes | CHARMM, NAMD, AMBER, GROMACS, OpenMM |
CHARMM-FQ | Fluctuating charge | N/A | N/A | Yes | No | No | No | Yes | CHARMM |
SIBFA | Induced dipole | Yes | Multipole | Yes | No | No | No | No | TINKER |
ABEEMσπ | Fluctuation charge | N/A | Distributed charges | Yes | Yes | No | No | No | TINKER |