Table 2.
Average PNear values for the normalized covalent labeling score versus RMSD distributions (in triplicate) for the 20 benchmark proteins with 35% false negatives at various percentages of false positives.
% False Positive Data Points | ||||||
---|---|---|---|---|---|---|
Residue Type Set | 0% | 5% | 10% | 15% | 20% | 25% |
All | 0.85 | 0.86 | 0.61 | 0.56 | 0.58 | 0.57 |
HRF | 0.51 | 0.40 | 0.43 | 0.20 | 0.25 | 0.23 |
DEPC | 0.34 | 0.35 | 0.28 | 0.16 | 0.27 | 0.26 |
Common | 0.73 | 0.71 | 0.62 | 0.62 | 0.68 | 0.61 |
Most Varied | 0.25 | 0.18 | 0.06 | 0.03 | 0.06 | 0.09 |
Optimal | 0.81 | 0.83 | 0.84 | 0.40 | 0.57 | 0.54 |