Table 1.
Detection of CoVs in Rhinolophus bats by RT-PCR.
| Bat Species | Samples | CoV Species Positive (Positive Rate %) | Province1 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| HKU2 | HKU8 | HuB2013 | Mi-BtCoV 1 | SARSr-CoV | BtCoV/Rh/YN2012 | Other AlphaCoVs | |||
| R.affinis | 499 | 52(10.4) | 2(0.4) | 2(0.4) | 3(0.6) | 5, 7, 8, 10, 13, 18, 19 | |||
| R.blythi | 17 | 5,11,18 | |||||||
| R.ferrumequinum | 238 | 1(0.4) | 12(5.0) | 1,3,4,7,9,10,14,15,18 | |||||
| R.lepidus | 21 | 3 | |||||||
| R.luctus | 8 | 5,8,19 | |||||||
| R.macrotis | 31 | 1(3.2) | 1(3.2) | 2,5,6,9,11,13,1,18 | |||||
| R.monoceros | 5 | 18 | |||||||
| R.pearsoni | 106 | 3,5,6,7,10,17,18 | |||||||
| R.pusillus | 283 | 4(1.4) | 2(0.7) | 3,5,6,9,10,11,13,14 | |||||
| R.shamelli | 55 | 25(45.5) | 10(18.2) | 1(0.4) | 2(0.7)2 | 18 | |||
| R.sinicus | 740 | 12(1.6) | 3(0.4) | 72(9.7) | 6(0.8) | 2(0.3)3 | 3,5,6,7,8,11,12,13,16,18,19 | ||
| R.spp. | 58 | 2,6,7,18 | |||||||
| Total | 2061 | 94(4.6) | 12(0.6) | 1(0.05) | 4(0.2) | 89(4.3) | 9(0.4) | 4(0.2) | |
1 Abbreviations for provinces: 1. Beijing; 2.Chongqing; 3. Fujian; 4. Gansu; 5. Guangdong; 6. Guangxi; 7. Guizhou; 8. Hainan; 9. Hebei; 10. Henan; 11: Hubei; 12. Hunan; 13.Jiangsu; 14.Shandong; 15.Shanxi; 16. Sichuan. 17: Tibet; 18.Yunnan; 19.Zhejiang. 2 Putatitive novel AlphaCoVs (RshBtCoV/4017-1), previously published.3 Putative novel AlphaCoVs (RsBtCoV/13187), unpublished.