Fig. 4.
Rooted accelerated transformation tree based on WGS of 45 MRSA ST2371 isolates. The outgroup was rooted using S. aureus ST22 isolate HO 5096. Tips are labelled by the sample’s ERR number followed by the origin of sample, patient (P) or healthcare worker. Branch lengths are SNV-scaled. The inner and outer coloured rings correspond to the sub-lineages and major lineage identified by rPinecone, respectively.