Table 3.
Summary of the genome assembly.
Sample ID | Length | Number | ||
---|---|---|---|---|
Contig (bp) | Scaffold (bp) | Contig | Scaffold | |
Total | 2,282,988,448 | 2,319,520,870 | 470,184 | 360,291 |
Max | 453,655 | 40,162,337 | — | — |
Number >= 2000 | — | — | 100,848 | 13,027 |
N50* | 41,757 | 7,221,511 | 15,524 | 84 |
N60 | 32,248 | 5,116,999 | 21,745 | 121 |
N70 | 23,516 | 3,324,563 | 30,018 | 177 |
N80 | 15,027 | 1,848,865 | 42,079 | 269 |
N90 | 5,528 | 257,323 | 65,609 | 576 |
*N50 referred to the scaffold larger than half the genome size which was added up from large to small.