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. 2019 May 16;9:7482. doi: 10.1038/s41598-019-44013-9

Figure 3.

Figure 3

RMSD of wild type and mutants RpsA. Apo state (A–D) Complex with PZA (E–H). RpsA(WT); ribosomal protein S1 (RpsA) WT (black) retained a constant RMSD from 25 ns to 100 ns. RMSD of D342N seems to be inconsistent as it rises at 100 ns. In apo state, D343N exhibited a continuous rise in RMSD from 0 ns to 78 ns. However, a little fall have been shown at 95 ns–100 ns. While in complex state, the RMSD is little stable but seems, still rising at 83 ns–100 ns. RMSD of MT A344P is rising at 80 ns–100 ns in apo state, however, it seems stable in complex state. MT I351F attained a little higher RMSD in both, apo and complex state. However, it seems highly unstable in apo state, rising continuously 20 ns–100 ns.