Table 3.
Ten Highest Fold Changes of Downregulated and Upregulated Genes in QS-Deficient Mutant.
| Locus tag | Gene | Log2 FC |
|---|---|---|
| Down-regulated genes | ||
| A9801_RS14870 | 3-methylcrotonyl-CoA carboxylase subunit alpha, liuD | −9.61393 |
| A9801_RS14965 | NAD(P)-dependent oxidoreductase | −9.42986 |
| A9801_RS15335 | phenylacetate-CoA ligase, paaK | −9.37778 |
| A9801_RS14955 | hypothetical protein | −9.30532 |
| A9801_RS16540 | aminoglycoside N-acetyltransferase AAC(3)-IId | −9.20034 |
| A9801_RS15345 | protein paaH | −9.18939 |
| A9801_RS14890 | TetR family transcriptional regulator | −9.1678 |
| A9801_RS14960 | catalase HPII | −9.1216 |
| A9801_RS14875 | enoyl-CoA hydratase | −9.00212 |
| A9801_RS14855 | MFS transporter | −8.94764 |
| Up-regulated genes | ||
| A9801_RS10685 | UmuC | 3.880526 |
| A9801_RS13285 | hypothetical protein | 2.842797 |
| A9801_RS13465 | GntR family transcriptional regulator | 2.737668 |
| A9801_RS06690 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 2.725173 |
| A9801_RS13170 | alpha/beta hydrolase | 2.641788 |
| A9801_RS01690 | terminase | 2.622548 |
| A9801_RS10575 | ammonium transporter | 2.621587 |
| A9801_RS16845 | allantoin permease | 2.61855 |
| A9801_RS05955 | MFS transporter | 2.613142 |
| A9801_RS12660 | non-ribosomal peptide synthetase | 2.608198 |