. 2019 Apr 25;8(4):377. doi: 10.3390/cells8040377

Table 2.

Summary of genetic variation and haplotype frequencies across seven populations of crested ibis.

Population			Wild	YX	LGT	DQ	BJ	SD	HN	Total
Sample size (MHC/microsatellite)			8/8	54/65	48/50	45/45	35/35	18/18	86/86	294/307
MHC	Homozygote ¹		5	34	34	23	27	9	45	177
	Heterozygote ²		3	20	14	22	8	9	41	117
	Haplotype frequency (%)	HT01	6.3	7.4	5.2	10.0	0.0	0.0	0.0	3.9
		HT02	43.8	28.7	44.8	51.1	14.3	25.0	28.5	33.2
		HT03	25.0	26.9	21.9	18.9	60.0	36.1	32.0	30.8
		HT04	12.5	19.4	15.6	6.7	2.9	22.2	32.0	18.5
		HT05	12.5	17.6	11.5	12.2	8.6	5.6	1.2	9.0
		HT06	0.0	0.0	1.0	1.1	0.0	0.0	0.0	0.3
		HT07	0.0	0.0	0.0	0.0	14.3	11.1	6.4	4.3
		HTs02/06	43.8	28.7	45.8	52.2	14.3	25.0	28.5	33.5
		HTs03/07	25.0	26.9	21.9	18.9	74.3	47.2	38.4	35.1
		HTs04/05	25.0	37.0	27.1	18.9	11.5	27.8	33.2	27.5
	H_O		0.63	0.78	0.75	0.71	0.54*	0.78	0.81	0.71
	H_E		0.76	0.78	0.72	0.68	0.60	0.76	0.71	0.75
	AR		5.00	4.67	4.59	4.60	4.09	4.61	3.84	4.78
Microsatellite	H_O		0.43	0.50	0.46	0.44	0.49	0.55	0.39	0.45
	H_E		0.49	0.45	0.44	0.43	0.46	0.47	0.37	0.44
	AR		2.27	2.22	2.22	2.14	2.14	2.17	2.13	2.23

¹ Homozygous at DAB and/or UAA; ² Heterozygous at both DAB and UAA; AR, allelic richness; H_E, expected heterozygosity (haplotype level for MHC); H_O, observed heterozygosity (haplotype level for MHC). * significant deficiency of heterozygotes at P < 0.05.