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List of individual somatic variant callers embedded in NeoMutate
| Tool | Version | Methodology |
|---|---|---|
| MuTect2 | 3.8 | Bayesian classifier |
| Strelka2 | 2.8.4 | Bayesian model of admixture |
| VarScan2 | 2.4.3 | Heuristic methodology with statistical test |
| VarDict | 1.4 | Combined heuristic and statistical algorithm |
| SomaticSniper | 1.0.5.0 | Bayesian approach for estimating genotype probabilities |
| Freebayes | 0.1.2 | Bayesian model with error probabilities |
| Lancet | 1.0.5 | Colored de Bruijn graphs |
