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. 2019 May 7;15(5):e1008142. doi: 10.1371/journal.pgen.1008142

Table 1. Simulated Type I error rates based on 10,000 datasets.

Significance level Optimal Omnibus-Fisher Omnibus-Fisher Usual Fisher
Independent G, M and E with binary traits
0.05 0.0521 0.0516 0.0522
0.01 0.0100 0.0109 0.0108
0.001 0.0015 0.0015 0.0015
Independent G, M and E with continuous traits
0.05 0.0483 0.0472 0.0478
0.01 0.0088 0.0095 0.0095
0.001 0.0007 0.0009 0.0009
G and E correlated with binary traits
0.05 0.0488 0.0526 0.0675
0.01 0.0089 0.0107 0.0161
0.001 0.0010 0.0015 0.0029
G and E correlated with continuous traits
0.05 0.0525 0.0509 0.0655
0.01 0.0093 0.0096 0.0166
0.001 0.0005 0.0011 0.0029