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. 2019 May 17;10:2201. doi: 10.1038/s41467-019-10242-9

Table 1.

Comparison of BANK1 and BLK variants found in SLE patients

MAFa Type AA change CADD HC with allele (n) SLE with allele (n)
BLK
GWAS SNPs
 rs2248932 0.61 Intron N/A N/A
 rs13277113 0.25 Intron N/A N/A
 rs2736340 0.25 Intron N/A N/A
NRLF SNPs
 rs55758736 0.01 Missense A71T 5.86 1 7
 rs73663163 0.0005 Missense R131W 14.93 0 1
 rs144615291 0.00004 Missense R131Q 16.05 0 1 (n = 1 hom)
 rs141865425 0.003 Missense R238Q 22.2 2 3
 N/A Novel Missense P307R 21.8 0 1
 rs77401687 0.002 Missense K325T 18.18 0 1
 rs758750492 0.000004 Missense Y350H 15.7 0 2
 rs146505280 0.0008 Missense R359C 20.1 1 1
 N/A Novel Missense R433Q 17.35 0 1
 rs202162624 0.002 Missense R450H 18.23 0 2
BANK1
GWAS SNPs
 rs10516487 0.26 Missense R61H 13.9 56 (n = 26 hom) 59 (n = 9 hom)
NRLF SNPs
 rs35978636 0.01 Missense W40C 29.8 6 10
 rs201960198 0.0001 Missense D400G 27.4 0 1

aMinor allelic frequency by gnomAD

GWAS  genome wide association study, NRLF  novel, rare and low-frequency, Hom homozygous, HC healthy control, SLE systemic lupus erythematosus