Table 1.
MAFa | Type | AA change | CADD | HC with allele (n) | SLE with allele (n) | |
---|---|---|---|---|---|---|
BLK | ||||||
GWAS SNPs | ||||||
rs2248932 | 0.61 | Intron | N/A | N/A | – | – |
rs13277113 | 0.25 | Intron | N/A | N/A | – | – |
rs2736340 | 0.25 | Intron | N/A | N/A | – | – |
NRLF SNPs | ||||||
rs55758736 | 0.01 | Missense | A71T | 5.86 | 1 | 7 |
rs73663163 | 0.0005 | Missense | R131W | 14.93 | 0 | 1 |
rs144615291 | 0.00004 | Missense | R131Q | 16.05 | 0 | 1 (n = 1 hom) |
rs141865425 | 0.003 | Missense | R238Q | 22.2 | 2 | 3 |
N/A | Novel | Missense | P307R | 21.8 | 0 | 1 |
rs77401687 | 0.002 | Missense | K325T | 18.18 | 0 | 1 |
rs758750492 | 0.000004 | Missense | Y350H | 15.7 | 0 | 2 |
rs146505280 | 0.0008 | Missense | R359C | 20.1 | 1 | 1 |
N/A | Novel | Missense | R433Q | 17.35 | 0 | 1 |
rs202162624 | 0.002 | Missense | R450H | 18.23 | 0 | 2 |
BANK1 | ||||||
GWAS SNPs | ||||||
rs10516487 | 0.26 | Missense | R61H | 13.9 | 56 (n = 26 hom) | 59 (n = 9 hom) |
NRLF SNPs | ||||||
rs35978636 | 0.01 | Missense | W40C | 29.8 | 6 | 10 |
rs201960198 | 0.0001 | Missense | D400G | 27.4 | 0 | 1 |
aMinor allelic frequency by gnomAD
GWAS genome wide association study, NRLF novel, rare and low-frequency, Hom homozygous, HC healthy control, SLE systemic lupus erythematosus