Table 2.
Top ten enriched terms in C. puteana and S. lacrymans DEG genes with lncRNAs in their promoter region.
| Species | GO | Category | GO name | Ratio in DEG genes | Ratio in genome | p value | p value fdr |
|---|---|---|---|---|---|---|---|
| C puteana | GO:0006508 | BP | Proteolysis | 8,8 | 2,1 | 1, 19E − 05 | 0,006 |
| GO:0005975 | BP | Carbohydrate metabolic process | 6,1 | 1,4 | 0,000202 | 0,076 | |
| GO:0006810 | BP | Transport | 8,8 | 2,8 | 0,000224 | 0,076 | |
| GO:0000272 | BP | Polysaccharide catabolic process | 1,4 | 0,0 | 0,00165 | 0,3 | |
| GO:0004190 | MF | Aspartic-type endopeptidase activity | 4,8 | 0,7 | 5, 65E − 05 | 0,018 | |
| GO:0004553 | MF | Hydrolase activity, hydrolyzing O-glycosyl compounds | 4,8 | 0,9 | 0,000315 | 0,09 | |
| GO:0005215 | MF | Transporter activity | 6,1 | 1,7 | 0,000865 | 0,202 | |
| GO:0008810 | MF | Cellulase activity | 1,4 | 0,0 | 0,00111 | 0,228 | |
| GO:0004338 | MF | Glucan exo-1,3-beta-glucosidase activity | 1,4 | 0,1 | 0,00304 | 0,414 | |
| GO:0030246 | MF | Carbohydrate binding | 2,0 | 0,2 | 0,00472 | 0,54 | |
|
| |||||||
| S. lacrymans | GO:0005975 | BP | Carbohydrate metabolic process | 5,8 | 1,1 | 0,000289 | 0,088 |
| GO:0006725 | BP | Cellular aromatic compound metabolic process | 2,5 | 0,2 | 0,00272 | 0,41 | |
| GO:0016998 | BP | Cell wall macromolecule catabolic process | 1,7 | 0,1 | 0,00374 | 0,47 | |
| GO:0008152 | BP | Metabolic process | 11,7 | 5,3 | 0,0059 | 0,554 | |
| GO:0004553 | MF | Hydrolase activity, hydrolyzing O-glycosyl compounds | 5,8 | 0,6 | 6, 87E − 06 | 0,01 | |
| GO:0016491 | MF | Oxidoreductase activity | 10,0 | 3,1 | 0,000372 | 0,092 | |
| GO:0019131 | MF | Obsolete tripeptidyl-peptidase I activity | 1,7 | 0,1 | 0,00236 | 0,378 | |
| GO:0003824 | MF | Catalytic activity | 11,7 | 5,3 | 0,00561 | 0,548 | |
| GO:0018658 | MF | Salicylate 1-monooxygenase activity | 1,7 | 0,1 | 0,00846 | 0,656 | |
| GO:0048037 | MF | Cofactor binding | 2,5 | 0,4 | 0,00858 | 0,688 | |
∗Ratios correspond to percentage of genes with this associated GO term.