Table 2.
Multiple stepwise regression model results for dominant bacterial and fungal phyla (and classes for Proteobacteria) that significantly correlated with a secondary metabolites. Soil origin was also included as an explanatory variable to discern metabolite versus soil effects. Raw abundances were centered log-ratio transformed prior to analysis. Type-1 error rates given are FDR-corrected
Full model statistics | ||||||
---|---|---|---|---|---|---|
Microbial Phylum | Explanatory variable | T | p-value | F-statistic | Adj. R2 | p-value |
Bacteria | ||||||
Betaproteobacteria | Intercept | 67.3 | < 0.01 | 13.07 | 0.19 | < 0.01 |
Soil(Corvallis) | −2.84 | < 0.01 | ||||
salicylic acid | −2.67 | < 0.01 | ||||
Deltaproteobacteria | Intercept | 17.99 | < 0.01 | 21.99 | 0.38 | < 0.01 |
Soil(Corvallis) | −7.33 | < 0.01 | ||||
catechin | 1.74 | 0.09 | ||||
phenolics | −2.17 | 0.03 | ||||
Acidobacteria | Intercept | 70.39 | < 0.01 | 51.94 | 0.6 | < 0.01 |
Soil(Corvallis) | −10.26 | < 0.01 | ||||
saliyclic acid | −1.49 | 0.14 | ||||
populin | 2.66 | < 0.01 | ||||
Actinobacteria | Intercept | 45.92 | < 0.01 | 25.79 | 0.42 | < 0.01 |
Soil(Corvallis) | 8.48 | < 0.01 | ||||
tremuloidin | 2.25 | 0.03 | ||||
populin | −1.85 | 0.07 | ||||
Verrucomicrobia | Intercept | 62.91 | < 0.01 | 22.79 | 0.39 | < 0.01 |
Soil(Corvallis) | −5.68 | < 0.01 | ||||
salicylic acid | −2.56 | 0.01 | ||||
populin | 2.29 | 0.02 | ||||
Bacteroidetes | Intercept | 36.34 | < 0.01 | 10.82 | 0.22 | < 0.01 |
Soil(Corvallis) | −3.49 | < 0.01 | ||||
salicylic acid | −1.82 | 0.07 | ||||
populin | 2.51 | 0.01 | ||||
Chloroflexi | Intercept | 48.68 | < 0.01 | 41.9 | 0.45 | < 0.01 |
Soil(Corvallis) | −8.98 | < 0.01 | ||||
salicylic acid | 2.15 | 0.03 | ||||
Gemmatimonadetes | Intercept | 45.06 | < 0.01 | 7.65 | 0.12 | < 0.01 |
salicylic acid | −2.79 | < 0.01 | ||||
populin | 2.75 | < 0.01 | ||||
Firmicutes | Intercept | 7.93 | < 0.01 | 3 | 0.08 | 0.02 |
tremuloidin | 2.93 | < 0.01 | ||||
catechin | 2.24 | 0.03 | ||||
populin | −1.53 | 0.13 | ||||
phenolics | −2.11 | 0.04 | ||||
Fungi | ||||||
Mortierellomycota | Intercept | 24.9 | < 0.01 | 5.96 | 0.09 | < 0.01 |
tremuloidin | −2.42 | 0.02 | ||||
populin | 2.41 | 0.02 |
Explanatory variables deemed statistically significant are bold