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. 2019 May 16;7:e6931. doi: 10.7717/peerj.6931

Table 5. Novel OTUs generated in this study; sequence length and closest matches in GenBank.

OTU Sequence length (bp) Closest match in GenBank Match Reference
Sp.1 178 KP691408: Uncultured Phytophthora clone sp4 100% over 178 bp Català et al. (2017)
Sp.2 184 MF036185: Phytophthora castanetorum 99% over 184 bp Jung et al. (2017a)
KX011271: Phytophthora versiformis 99% over 184 bp Paap et al. (2017b)
MH178340: Phytophthora quercina 99% over 184 bp Unpublished sequence: J. Legeay, INRA, France
HQ261710: Phytophthora sp. ohioensis voucher P16050 99% over 184 bp Robideau et al. (2011)
Sp.3 184 KP208439: Uncultured Phytophthora clone R2 MOTU14 99% over 184 bp Català, Pérez-Sierra & Abad-Campos (2015)
Sp.4 283 MF446671: Phytophthora ramorum isolate Soil 0010 92% over 224 bp (sites 1–224) and 92% over 127 bp (sites 159-283) Unpublished sequence: M. van Agtmaal, Imperial College UK
MF446670: Plasmopara halstedii isolate Soil 0007 91% over 224 bp (sites 1–224) and 94% over 123 bp (sites 164-283) Unpublished sequence: M. van Agtmaal, Imperial College UK
Sp.5 199 KU518801: Phytophthora boehmeriae strain OCPC73 91% over 51 bp (sites 1–51) Unpublished sequence: Madhura et al. Indian Institute of Horticultural Research, India
Sp.6 186 KP208464: Uncultured Phytophthora clone R2 MOTU7 from forest soil/water in northern Spain 99% over 186 bp Català, Pérez-Sierra & Abad-Campos (2015)
Sp.7 172 KY822497: Uncultured oomycete clone OTU201 89% over 54 bp (sites 1–54) Sapkota & Nicolaisen (2018)
Sp.8 262 KY822489: Uncultured oomycete clone OTU191 90% over 262 bp Sapkota & Nicolaisen (2018)
AY598696: Pythium rostratum strain CBS 53374 88% over 262 bp Robideau et al. (2011)
Sp.9 288 MF446670: Plasmopara halstedii isolate Soil 0007 89% over 226 bp (sites 1–226) and 96% over 125 bp (sites 165-288) Unpublished sequence: M. van Agtmaal, Imperial College UK
Sp.10 179 KX423738: P. cactorum voucher Chen 32 94% over 179 bp Chen et al. (2017)
Sp.11 279 MF446670: Plasmopara halstedii isolate Soil 0007 90% over 226 bp (sites 1–226) Unpublished sequence: M. van Agtmaal, Imperial College UK
Sp.12 259 KY822486: Uncultured oomycete clone OTU186 89% over 259 bp Sapkota & Nicolaisen (2018)
DQ648134: Pythium rostratum isolate P15645 88% over 259 bp Unpublished sequence: Moralejo et al., School of Engineering of Lullier, Switzerland