Table 1:
Gene | ENSEMBL | Forward | Reverse | Exon-exon | |||
---|---|---|---|---|---|---|---|
symbol | Gene ID | primer | Position | primer | Position | boundary | AE |
Cd36 | ENSMUSG00000002944 | GAACCTATTGAAGGCTTACATCCAA | 1063–1087 | TCCAGTTATGGGTTCCACATCTAA | 1134–1111 | yes | 1.85 |
Cpt1a | ENSMUSG00000024900 | CCAAACCCACCAGGCTACAG | 1625–1644 | AACTGGCACTGCTTAGGGATGT | 1702–1681 | yes | 1.90 |
Cpt1b | ENSMUSG00000078937 | CCCGAGCAGTGCCGGGAAGC | 1652–1671 | GAAATGAGCCAGCTGTAGGG | 1822–1803 | yes | 1.81 |
Cpt1c | ENSMUSG00000007783 | GACAACAAGGAGACAGACCAACAT | 2116–2139 | CCTTCAGTAGAGCCTGGTGCTT | 2191–2170 | yes | 1.88 |
Cpt2 | ENSMUSG00000028607 | TGGGCCAGGGCTTTGAC | 1787–1803 | ATGTTGTGGTTTATCCGCTGGTA | 1901–1879 | yes | 1.89 |
Crat | ENSMUSG00000026853 | ATGAGCATGCAGCTGCAGAA | 1258–1277 | GCGTAAGAGGTGTCCATGAAGA | 1867–1846 | yes | 1.90 |
Gapdh | ENSMUSG00000057666 | CCAGAACATCATCCCTGCATC | 649–669 | GGTAGGAACACGGAAGGCC | 751–733 | no | 1.93 |
Gpx4 | ENSMUSG00000075706 | AGGCAGGAGCCAGGAAGTAATC | 499–520 | CACAGATCTTGCTGTACATGTCAAA | 583–559 | yes | 1.96 |
Pak1ip1 | ENSMUSG00000038683 | GCCCTGACCAACCTAAGACAAT | 12661287 | GCTTGCTGTCACCACTTACATCA | 1370–1348 | yes | 1.92 |
Pole4 | ENSMUSG00000030042 | CGGGACAGGAAGCCATCTT | 269–287 | AGCAGTAGGCATCTTTTGCGATA | 346–324 | yes | 1.90 |
Slc27a1 | ENSMUSG00000031808 | AGATTGCCCACAGCGTTTTC | 1629–1648 | CATCACTAGCACGTCACCTGAGA | 1693–1671 | yes | 1.90 |
Slc27a2 | ENSMUSG00000027359 | CGTCACGGTCATTCAGTACATTG | 1663–1685 | TTGGTTTCTGCGGTGTGTTG | 1727–1708 | yes | 1.85 |
Slc27a3 | ENSMUSG00000027932 | CCCGACCTCGGTTTCTCA | 1939–1956 | CATCCTAACCTTCTGCTGTTTGAA | 2012–1989 | yes | 1.88 |
Slc27a4 | ENSMUSG00000059316 | CTTTGTGTACCCTATCCGTTTGG | 1566–1588 | GGCCTGGCTGACCTGGTT | 1669–1652 | yes | 1.90 |
Slc27a5 | ENSMUSG00000030382 | CCTGAGCAACCAGAAGACAAGA | 1262–1283 | CATTTGCCCGAAGTCCATTG | 1328–1309 | yes | 1.90 |
Slc27a6 | ENSMUSG00000024600 | CGTGACTGTGTTTCAGTACATTGG | 1119–1142 | CCTTCTCTCTGAGGCTGTTTGC | 1184–1163 | yes | 1.87 |
Slc2a1 | ENSMUSG00000028645 | GGGCATGTGCTTCCAGTATGT | 1498–1518 | ACGAGGAGCACCGTGAAGAT | 1569–1550 | yes | 1.90 |
Slc2a2 | ENSMUSG00000027690 | CCGGGATGATTGGCATGT | 1109–1126 | GTCATGCTCACGTAACTCATCCA | 1202–1180 | yes | 1.89 |
Slc2a3 | ENSMUSG00000003153 | TTGCTCCGTTTTCATGACGAT | 1161–1181 | GGGCCAGGTCCAATCTCAA | 1277–1259 | yes | 1.89 |
Slc2a4 | ENSMUSG00000018566 | CCGGCAGCCTCTGATCAT | 1020–1037 | CGACTCGAAGATGCTGGTTGA | 1116–1096 | yes | 1.90 |
Slc2a5 | ENSMUSG00000028976 | GGCGCTGCAGAACACCAT | 1800–1817 | AAGGCGTGTCCTATGACGTAGAC | 1877–1855 | yes | 1.90 |
Slc2a6 | ENSMUSG00000036067 | CAGCCTTCGTCCTCACTAACTACTT | 1394–1418 | GGCAGATGGCCGAGAAGAA | 1480–1462 | yes | 1.88 |
Slc2a7 | ENSMUSG00000062064 | AGCCCCCGCTACACTCTGA | 700–718 | GCAGCCTCCTTAGAGCTTGTCT | 766–745 | yes | 1.90 |
Slc2a8 | ENSMUSG00000026791 | TCGGTCACTGTGGGCATAATC | 955–975 | CCCTGCTCTGTCCATGATGA | 1023–1004 | no | 1.87 |
Slc2a9 | ENSMUSG00000005107 | GGCCCTGAACACTGAGAATGAC | 2475–2496 | TACATCCAGGACAGACATCATCAA | 2563–2540 | no | 1.89 |
Slc2a10 | ENSMUSG00000027661 | AAGCAGGTTCCCTCTAAACTTTGG | 1788–1811 | CATCCAGGCGATGGTACTGA | 1852–1833 | yes | 1.87 |
Slc2a12 | ENSMUSG00000037490 | CAAAGGCGAACTATGTGAAAAACA | 1897–1920 | TTACACTCTGGGAGCTGCTCTTG | 2008–1986 | yes | 1.87 |
Slc2a13 | ENSMUSG00000036298 | GACTCCTTCGGATCAAAATACCA | 1412–1434 | TGTAGCAGAAACCACAGTCTGGAT | 1497–1474 | yes | 1.83 |